RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 IL27RAQ6UWB1 636 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 DHFR2Q86XF0 187 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 LINC01599Q8WXQ3 324 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PKP2Q99959 881 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 SLC25A23Q9BV35 468 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 IGSF5Q9NSI5 407 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 SH3BP1Q9Y3L3 701 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 AP4B1Q9Y6B7 739 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 SYN3O14994 580 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 COCHO43405 550 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 ALDH1A1P00352 501 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PCNAP12004 261 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 AKT1P31749 480 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PRKAA2P54646 552 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 GPR17Q13304 367 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 OR4D1Q15615 310 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 TBCELQ5QJ74 424 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 ISCA2Q86U28 154 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PGAM4Q8N0Y7 254 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PDZD8Q8NEN9 1154 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PTCD2Q8WV60 388 aaKnown RBP15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 NCLNQ969V3 563 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PBXIP1Q96AQ6 731 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 FAR2Q96K12 515 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 C3orf30Q96M34 536 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 SMG9Q9H0W8 520 aaKnown RBP15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 POLR3BQ9NW08 1133 aaPredicted RBP15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 PSMD13Q9UNM6 376 aa15.29■□□□□ 0.04
TMEM55B-207ENST00000557041 CCDC189A1A4V9 331 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 CNPP09543 421 aaKnown RBP15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 SH3BP2P78314 561 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 CAP1Q01518 475 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 CLCQ05315 142 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 ELAVL2Q12926 359 aaKnown RBP15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 FRG1Q14331 258 aaKnown RBP15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 RALGPS2Q86X27 583 aaPredicted RBP15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 CLHC1Q8NHS4 586 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 SPAG4Q9NPE6 437 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 TREX1Q9NSU2 369 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 ADRA1AP35348 466 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 GDF5P43026 501 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 YBEYP58557 167 aaPredicted RBP15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 NOGQ13253 232 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 SEMA3AQ14563 771 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 NADSYN1Q6IA69 706 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 EEF1AKMT1Q8WVE0 214 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 ANKRD27Q96NW4 1050 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 WWOXQ9NZC7 414 aa15.28■□□□□ 0.04
TMEM55B-207ENST00000557041 GNGT2O14610 69 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 LDB2O43679 373 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 OR4F21O95013 312 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 UQCRBP14927 111 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 PRDX3P30048 256 aaKnown RBP15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 SGSHP51688 502 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 CYP4F8P98187 520 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 PLA2G4EQ3MJ16 856 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 PSAPL1Q6NUJ1 521 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 AAGABQ6PD74 315 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 TMEM207Q6UWW9 146 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 TMEM79Q9BSE2 394 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 TBCDQ9BTW9 1192 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 MFSD1Q9H3U5 465 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 DDX18Q9NVP1 670 aaKnown RBP15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 PLXNB2O15031 1838 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 GSTA4O15217 222 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 NBNO60934 754 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 TMCC1O94876 653 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 CLPTM1O96005 669 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 HSPA14Q0VDF9 509 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 SQLEQ14534 574 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 PIANPQ8IYJ0 282 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 ARRDC2Q8TBH0 407 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 GRIN3AQ8TCU5 1115 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 VPS50Q96JG6 964 aa15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 THUMPD3Q9BV44 507 aaKnown RBP15.27■□□□□ 0.04
TMEM55B-207ENST00000557041 WDR90Q96KV7 1748 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 TRIM38O00635 465 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 PRAMEF11O60813 436 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 SLC2A4P14672 509 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 MSLNQ13421 630 aaPredicted RBP15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 CYP51A1Q16850 503 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 C18orf21Q32NC0 220 aaPredicted RBP15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 BNIPLQ7Z465 357 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 ZBTB46Q86UZ6 589 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 PPM1MQ96MI6 270 aa15.27■□□□□ 0.03
TMEM55B-207ENST00000557041 C15orf38-AP3S2A0A0A6YYH1 394 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 A0A1W2PQ67 120 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 ARVCFO00192 962 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 URODP06132 367 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 PKMP14618 531 aaKnown RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 LBPP18428 481 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 IMPDH1P20839 514 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 IL10P22301 178 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 GABRR2P28476 465 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 LEPRP48357 1165 aaKnown RBP15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 IHHQ14623 411 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 ARPINQ7Z6K5 226 aa15.26■□□□□ 0.03
TMEM55B-207ENST00000557041 HERC6Q8IVU3 1022 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms