RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 AFMIDQ63HM1 303 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 DPPA4Q7L190 304 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 SLC26A9Q7LBE3 791 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 MRGPRGQ86SM5 289 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 TRIM74Q86UV6 250 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 NLRP14Q86W24 1093 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 FAM131BQ86XD5 332 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 GRHL3Q8TE85 626 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 SLC35C1Q96A29 364 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 SH3KBP1Q96B97 665 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 HDAC11Q96DB2 347 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 ZNF641Q96N77 438 aaPredicted RBP12.39□□□□□ -0.43
PSEN1-220ENST00000557037 GSX1Q9H4S2 264 aaPredicted RBP12.39□□□□□ -0.43
PSEN1-220ENST00000557037 STN1Q9H668 368 aaKnown RBP12.39□□□□□ -0.43
PSEN1-220ENST00000557037 OGFRQ9NZT2 677 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 CNOT8Q9UFF9 292 aaKnown RBP12.39□□□□□ -0.43
PSEN1-220ENST00000557037 STAP1Q9ULZ2 295 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 SNX7Q9UNH6 387 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 NEU2Q9Y3R4 380 aa12.39□□□□□ -0.43
PSEN1-220ENST00000557037 FAM170AA1A519 330 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 SNX2O60749 519 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 C9P02748 559 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 EDN3P14138 238 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 GNA15P30679 374 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 SRSF11Q05519 484 aaKnown RBP12.38□□□□□ -0.43
PSEN1-220ENST00000557037 ATP1A4Q13733 1029 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 MEA1Q16626 185 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 RAET1GQ6H3X3 334 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 IYDQ6PHW0 289 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 DNAAF5Q86Y56 855 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 CBARPQ8N350 705 aaPredicted RBP12.38□□□□□ -0.43
PSEN1-220ENST00000557037 TMEM102Q8N9M5 508 aaPredicted RBP12.38□□□□□ -0.43
PSEN1-220ENST00000557037 COQ10AQ96MF6 247 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 MDFIQ99750 246 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 MAGEB5Q9BZ81 275 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 SYNCQ9H7C4 482 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 TBC1D29Q9UFV1 150 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 MTMR6Q9Y217 621 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 PRKAB1Q9Y478 270 aa12.38□□□□□ -0.43
PSEN1-220ENST00000557037 KCNN4O15554 427 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 RHOQP17081 205 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ETV3P41162 512 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 VAV2P52735 878 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 RRADP55042 308 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 PDE1BQ01064 536 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ZNF235Q14590 738 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 KCNAB1Q14722 419 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 PYCR3Q53H96 274 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 INO80DQ53TQ3 878 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ACBD5Q5T8D3 534 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 CACHD1Q5VU97 1274 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 Q6ZS92 163 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 FAM92BQ6ZTR7 304 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 MED25Q71SY5 747 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 GALNT13Q8IUC8 556 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ZADH2Q8N4Q0 377 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ZBTB2Q8N680 514 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ENDOVQ8N8Q3 282 aaKnown RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 CASKIN2Q8WXE0 1202 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 NT5C3BQ969T7 300 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 RELTQ969Z4 430 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 CCDC47Q96A33 483 aaKnown RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 PGAP3Q96FM1 320 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 SCARF2Q96GP6 870 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 CHST8Q9H2A9 424 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 EPB41L1Q9H4G0 881 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ZBTB20Q9HC78 741 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 PDE7BQ9NP56 450 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 TMEM248Q9NWD8 314 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 OR12D3Q9UGF7 316 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 RARRES3Q9UL19 164 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 PCDHA7Q9UN72 937 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 CNTN6Q9UQ52 1028 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 SEC16AO15027 2179 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 NSD1Q96L73 2696 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-220ENST00000557037 AKAP6Q13023 2319 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 SPTBP11277 2137 aa12.37□□□□□ -0.43
PSEN1-220ENST00000557037 CACNA1CQ13936 2221 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 TMEM200CA6NKL6 621 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 FAM72CH0Y354 149 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 C19orf84I3L1E1 186 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
PSEN1-220ENST00000557037 YEATS4O95619 227 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 ALPPP05187 535 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 AMD1P17707 334 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 ME1P48163 572 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 GCNT1Q02742 428 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 TLE4Q04727 773 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 TUBB3Q13509 450 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 GRM3Q14832 879 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 SLC25A52Q3SY17 297 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 PTPN20Q4JDL3 420 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 FAM72AQ5TYM5 149 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms