RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZBTB11O95625 1053 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 IGLV3-25P01717 112 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 THP07101 528 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 HAPLN1P10915 354 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 MTHFD2P13995 350 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 NCF1P14598 390 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 LBPP18428 481 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 DCKP27707 260 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 PRDX3P30048 256 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 RFC2P35250 354 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 BRCC3P46736 316 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 SCNN1GP51170 649 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 C21orf59P57076 290 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 SEMA3AQ14563 771 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 MFSD10Q14728 455 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 PCBP1Q15365 356 aaKnown RBP eCLIP11.35□□□□□ -0.598e-10■■□□□ 11.9
SRP54-213ENST00000556994 HABP4Q5JVS0 413 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 MANEALQ5VSG8 457 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 NANOGP8Q6NSW7 305 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 TIGD7Q6NT04 549 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 TMEM214Q6NUQ4 689 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 PRMT9Q6P2P2 845 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 BLOC1S3Q6QNY0 202 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 LRRTM3Q86VH5 581 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 ZC3H7AQ8IWR0 971 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 DCP1BQ8IZD4 617 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 LRRC43Q8N309 656 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 ESAMQ96AP7 390 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 PLEKHA8Q96JA3 519 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 SLC30A3Q99726 388 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 C1orf50Q9BV19 199 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 TMEM165Q9HC07 324 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 ZFYVE28Q9HCC9 887 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 SDR39U1Q9NRG7 319 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 TBC1D23Q9NUY8 699 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 SH3GLB1Q9Y371 365 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 MAGED1Q9Y5V3 778 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 ARL5AQ9Y689 179 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 OAS3Q9Y6K5 1087 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 TCRBV5S2A0A599 114 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 UNCXA6NJT0 531 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 FGF10O15520 208 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 PEX11BO96011 259 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 MMP2P08253 660 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 FGF4P08620 206 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 EEF1DP29692 281 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 UFM1P61960 85 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 CBX3Q13185 183 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 EIF4EBP2Q13542 120 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 ATP1A4Q13733 1029 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 POLD3Q15054 466 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 SIRPB2Q5JXA9 342 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 KANK2Q63ZY3 851 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 ANKRD26P1Q6NSI1 321 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 C16orf87Q6PH81 154 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 RALGPS2Q86X27 583 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 TMEM86AQ8N2M4 240 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 RTL3Q8N8U3 475 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 DCBLD1Q8N8Z6 715 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 BLOC1S5Q8TDH9 187 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 NUDT8Q8WV74 236 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 SGCDQ92629 289 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 HMCESQ96FZ2 354 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 IMP4Q96G21 291 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 RNF145Q96MT1 663 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 MUS81Q96NY9 551 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 TINF2Q9BSI4 451 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 ARNT2Q9HBZ2 717 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 INTS7Q9NVH2 962 aaKnown RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 HACD3Q9P035 362 aa11.35□□□□□ -0.59
SRP54-213ENST00000556994 IFT80Q9P2H3 777 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 UXTQ9UBK9 157 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 EVLQ9UI08 416 aaPredicted RBP11.35□□□□□ -0.59
SRP54-213ENST00000556994 ZNF701M0R085 212 aaPredicted RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 SLC7A4O43246 635 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CRCPO75575 148 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 CAPN15O75808 1086 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 GOT2P00505 430 aaKnown RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 F2P00734 622 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 GPIP06744 558 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 SLC2A3P11169 496 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 PCNAP12004 261 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 BEX3Q00994 111 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 TGFBIQ15582 683 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ZNF829Q3KNS6 432 aaPredicted RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 PLA2G4EQ3MJ16 856 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 SLC44A4Q53GD3 710 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 RAB44Q7Z6P3 723 aaPredicted RBP11.34□□□□□ -0.59
SRP54-213ENST00000556994 KIAA2013Q8IYS2 634 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 NAT16Q8N8M0 369 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 OR13C4Q8NGS5 318 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 PSMG2Q969U7 264 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.34□□□□□ -0.59
SRP54-213ENST00000556994 PPP1R14BQ96C90 147 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 BIRC7Q96CA5 298 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 DOK1Q99704 481 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 MFSD1Q9H3U5 465 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 ARMC7Q9H6L4 198 aa11.34□□□□□ -0.59
SRP54-213ENST00000556994 AGO3Q9H9G7 860 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms