RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 SIX1Q15475 284 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 OGFOD3Q6PK18 319 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 MACC1Q6ZN28 852 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 SLITRK4Q8IW52 837 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 PRELID2Q8N945 189 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 ZSCAN1Q8NBB4 408 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 TP53I13Q8NBR0 393 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 GPR156Q8NFN8 814 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 TSACCQ96A04 125 aaPredicted RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 MAGOHBQ96A72 148 aaKnown RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 RHOXF2Q9BQY4 288 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 LRRC1Q9BTT6 524 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 SNRNP25Q9BV90 132 aaKnown RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 FZD10Q9ULW2 581 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 GPR34Q9UPC5 381 aa12.74□□□□□ -0.37
PSEN1-219ENST00000556951 FCF1Q9Y324 198 aaKnown RBP12.74□□□□□ -0.37
PSEN1-219ENST00000556951 ILVBLA1L0T0 632 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 MTSS1O43312 755 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 MMP20O60882 483 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 SEMA7AO75326 666 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 MCM3P25205 808 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 ADRA1BP35368 520 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 UQCRFS1P47985 274 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 SERPINH1P50454 418 aaKnown RBP12.73□□□□□ -0.37
PSEN1-219ENST00000556951 HK3P52790 923 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 CDH6P55285 790 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 TFDP2Q14188 446 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 DPYSL3Q14195 570 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 CCNG2Q16589 344 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 ALG11Q2TAA5 492 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 ZNF805Q5CZA5 627 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 C8orf74Q6P047 294 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 MAATS1Q7Z4T9 603 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 TFAP2DQ7Z6R9 452 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 FSTL5Q8N475 847 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-219ENST00000556951 NKD1Q969G9 470 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 NTAN1Q96AB6 310 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 FUBP1Q96AE4 644 aaKnown RBP12.73□□□□□ -0.37
PSEN1-219ENST00000556951 RAB7BQ96AH8 199 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 HERPUD2Q9BSE4 406 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 SPON2Q9BUD6 331 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 FRMD8P1Q9BZ68 369 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-219ENST00000556951 B3GNT4Q9C0J1 378 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 LRRC19Q9H756 370 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 ANKZF1Q9H8Y5 726 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 PCDH18Q9HCL0 1135 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 HECAQ9UBI9 543 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-219ENST00000556951 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-219ENST00000556951 APPL1Q9UKG1 709 aa12.73□□□□□ -0.37
PSEN1-219ENST00000556951 FAM187AA6NFU0 413 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 B4GAT1O43505 415 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 DDAH2O95865 285 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 CD48P09326 243 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 CCL4P13236 92 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 COILP38432 576 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 FNTAP49354 379 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 MAPK10P53779 464 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 KCNAB2Q13303 367 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 MTA1Q13330 715 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 DHX34Q14147 1143 aaKnown RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 C16orf72Q14CZ0 275 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 LLGL1Q15334 1064 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 ELOCQ15369 112 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 TCEA2Q15560 299 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 DPYSL2Q16555 572 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 EFHC2Q5JST6 749 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 KAZNQ674X7 775 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 CAPRIN2Q6IMN6 1127 aaKnown RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 FAM131BQ86XD5 332 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 RFX6Q8HWS3 928 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 CCNJLQ8IV13 435 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 HID1Q8IV36 788 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 CCDC185Q8N715 623 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 Q8N9G6 341 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 JPH3Q8WXH2 748 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 ISG20Q96AZ6 181 aaKnown RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 TMEM159Q96B96 161 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 C1orf74Q96LT6 269 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 RNF157Q96PX1 679 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 PARD6BQ9BYG5 372 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 TKTL2Q9H0I9 626 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 DDX47Q9H0S4 455 aaKnown RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 SEMA6CQ9H3T2 930 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 DHX35Q9H5Z1 703 aaKnown RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 ZDHHC6Q9H6R6 413 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 GPATCH2LQ9NWQ4 482 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-219ENST00000556951 PCYOX1Q9UHG3 505 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 TUBD1Q9UJT1 453 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 AP4E1Q9UPM8 1137 aa12.72□□□□□ -0.37
PSEN1-219ENST00000556951 RNF215Q9Y6U7 377 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms