RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF140P52738 457 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TMPRSS15P98073 1019 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 DR1Q01658 176 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 BNIP3Q12983 259 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 PTK6Q13882 451 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 KCNJ11Q14654 390 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TPSAB1Q15661 275 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 ALG11Q2TAA5 492 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 CCDC38Q502W7 563 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 DOK6Q6PKX4 331 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 FAM151BQ6UXP7 276 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 ADAMTSL4Q6UY14 1074 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 MICALCLQ6ZW33 695 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 ZNF534Q76KX8 674 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 NLRP8Q86W28 1048 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 SPATA4Q8NEY3 305 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 OR13C4Q8NGS5 318 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 CPT1BQ92523 772 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 SLCO2A1Q92959 643 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TSACCQ96A04 125 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 PDXPQ96GD0 296 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 TRIM51Q9BSJ1 452 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 FGF22Q9HCT0 170 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 MRPL40Q9NQ50 206 aaKnown RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 RAD18Q9NS91 495 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 NFKBIL1Q9UBC1 381 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-225ENST00000556798 KLQ9UEF7 1012 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 ASIC3Q9UHC3 531 aa17.39■□□□□ 0.37
SHMT2-225ENST00000556798 C2orf81A6NN90 581 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 KIF2AO00139 706 aaPredicted RBP17.38■□□□□ 0.37
SHMT2-225ENST00000556798 CCL22O00626 93 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 TTI1O43156 1089 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 GPR39O43194 453 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 DFNA5O60443 496 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 PYGLP06737 847 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 ZNF883P0CG24 379 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 CD59P13987 128 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 NME1P15531 152 aaKnown RBP17.38■□□□□ 0.37
SHMT2-225ENST00000556798 JUNDP17535 347 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 RXRGP48443 463 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 SESN2P58004 480 aaPredicted RBP17.38■□□□□ 0.37
SHMT2-225ENST00000556798 MRPS25P82663 173 aaKnown RBP17.38■□□□□ 0.37
SHMT2-225ENST00000556798 TCEA2Q15560 299 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 RD3Q7Z3Z2 195 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 JAMLQ86YT9 394 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 HID1Q8IV36 788 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 PHACTR4Q8IZ21 702 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 TRAM1L1Q8N609 369 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
SHMT2-225ENST00000556798 OR1E3Q8WZA6 343 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 HIC2Q96JB3 615 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 PLEKHG4BQ96PX9 1271 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 ZSCAN5AQ9BUG6 496 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 CDH19Q9H159 772 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 SUDS3Q9H7L9 328 aaPredicted RBP17.38■□□□□ 0.37
SHMT2-225ENST00000556798 ARFGAP3Q9NP61 516 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 FKBPLQ9UIM3 349 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 MOSPD1Q9UJG1 213 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 CDC23Q9UJX2 597 aa17.38■□□□□ 0.37
SHMT2-225ENST00000556798 CNOT6Q9ULM6 557 aaKnown RBP17.38■□□□□ 0.37
SHMT2-225ENST00000556798 SPTBN4Q9H254 2564 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 GLYATL1P3A0A0U1RQE8 302 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 GOLGA8MH3BSY2 632 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 GAPDHSO14556 408 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 SLC30A4O14863 429 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 PIAS2O75928 621 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 CSF2P04141 144 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 HOXC4P09017 264 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 ADCY8P40145 1251 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 MAGEA6P43360 314 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 POLD2P49005 469 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 SRP54P61011 504 aaKnown RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 PPARDQ03181 441 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 CHRNA6Q15825 494 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 ATP13A5Q4VNC0 1218 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 ZNF648Q5T619 568 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 OR56A4Q8NGH8 313 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 SAP25Q8TEE9 199 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 COX14Q96I36 57 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 DNAJC1Q96KC8 554 aaKnown RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 RUNDC3BQ96NL0 473 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 FRMD8Q9BZ67 464 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 IL26Q9NPH9 171 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 UCKL1Q9NWZ5 548 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 APOBEC3BQ9UH17 382 aaKnown RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 TMEM98Q9Y2Y6 226 aa17.37■□□□□ 0.37
SHMT2-225ENST00000556798 OAS3Q9Y6K5 1087 aaKnown RBP17.37■□□□□ 0.37
SHMT2-225ENST00000556798 H3BM21 787 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 YKT6O15498 198 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 KELP23276 732 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 CA5AP35218 305 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 CRADDP78560 199 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 CKAP4Q07065 602 aaKnown RBP17.36■□□□□ 0.37
SHMT2-225ENST00000556798 ZDHHC20Q5W0Z9 365 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 SETD7Q8WTS6 366 aaKnown RBP17.36■□□□□ 0.37
SHMT2-225ENST00000556798 CAMK1GQ96NX5 476 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 LRRC61Q9BV99 259 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 CYP4F12Q9HCS2 524 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 BTBD3Q9Y2F9 522 aa17.36■□□□□ 0.37
SHMT2-225ENST00000556798 ARHGEF17Q96PE2 2063 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms