RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 DPCR1Q3MIW9 517 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 PAPD7Q5XG87 772 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 RUFY3Q7L099 469 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 TICAM2Q86XR7 235 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 CCDC105Q8IYK2 499 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 ZDHHC23Q8IYP9 409 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 CADM3Q8N126 398 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 ZCCHC9Q8N567 271 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 FRMD1Q8N878 549 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 CCDC89Q8N998 374 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 OR4N2Q8NGD1 307 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 TMEM174Q8WUU8 243 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 FAM149B1Q96BN6 582 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 INTS12Q96CB8 462 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 RNF183Q96D59 192 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 ZC3HAV1LQ96H79 300 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 NEK1Q96PY6 1258 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 BBS4Q96RK4 519 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 ITPAQ9BY32 194 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 LRRC2Q9BYS8 371 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 CRNKL1Q9BZJ0 848 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 B3GNT4Q9C0J1 378 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 PRSS22Q9GZN4 317 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 SYNCQ9H7C4 482 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 DBNDD1Q9H9R9 158 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 WDR6Q9NNW5 1121 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 CD209Q9NNX6 404 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 SPATS2LQ9NUQ6 558 aaKnown RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 HCFC1R1Q9NWW0 138 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 AATFQ9NY61 560 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 SEL1LQ9UBV2 794 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 ZNF70Q9UC06 446 aaPredicted RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 POLLQ9UGP5 575 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 HAO1Q9UJM8 370 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 CORO1CQ9ULV4 474 aaPredicted RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 GPR34Q9UPC5 381 aa4.35□□□□□ -1.71
TRAV15-201ENST00000556680 RPAP1Q9BWH6 1393 aaPredicted RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 COL11A1P12107 1806 aaPredicted RBP4.35□□□□□ -1.71
TRAV15-201ENST00000556680 MYH7BA7E2Y1 1941 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 GREB1LQ9C091 1923 aaPredicted RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 A6NCN8 305 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 USP17L23D6RBM5 183 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 PTGES3LE9PB15 166 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 ADAM10O14672 748 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 LDLRAD4O15165 306 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 PRKAB2O43741 272 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 ATP2C2O75185 946 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 MTA2O94776 668 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 BAG3O95817 575 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TOP3BO95985 862 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 EIF2S1P05198 315 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 PRR35P0CG20 571 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TFPIP10646 304 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CHRNB1P11230 501 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 ENO3P13929 434 aaPredicted RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 ALOX12P18054 663 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 MAPK4P31152 587 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TNFSF8P32971 234 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 BTDP43251 543 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 GABRB2P47870 512 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CENPAP49450 140 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CLCN5P51795 746 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 SLC18A2Q05940 514 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 ITGADQ13349 1161 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 FRG1Q14331 258 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 RNPS1Q15287 305 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TRIP6Q15654 476 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 RILPL1Q5EBL4 403 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 SLC2A7Q6PXP3 512 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 DEF8Q6ZN54 512 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CHST3Q7LGC8 479 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TDRPQ86YL5 185 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CCDC83Q8IWF9 413 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TEX11Q8IYF3 940 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TTC39CQ8N584 583 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 NCOA7Q8NI08 942 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CEP76Q8TAP6 659 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 WIPF2Q8TF74 440 aaPredicted RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 SDR42E1Q8WUS8 393 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 POMGNT1Q8WZA1 660 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 ARHGEF2Q92974 986 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 GTF3C6Q969F1 213 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 YME1L1Q96TA2 773 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 NUDT16L1Q9BRJ7 211 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TM6SF1Q9BZW5 370 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 COA1Q9GZY4 146 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 LHPPQ9H008 270 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CDT1Q9H211 546 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 GHITMQ9H3K2 345 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 MUC13Q9H3R2 512 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 TASP1Q9H6P5 420 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 NCKIPSDQ9NZQ3 722 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CHMP5Q9NZZ3 219 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 PTGFRNQ9P2B2 879 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 INTS6Q9UL03 887 aaKnown RBP4.34□□□□□ -1.71
TRAV15-201ENST00000556680 MKLN1Q9UL63 735 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 COG5Q9UP83 839 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 SMC3Q9UQE7 1217 aa4.34□□□□□ -1.71
TRAV15-201ENST00000556680 CARD8Q9Y2G2 431 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms