RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CNOT6Q9ULM6 557 aaKnown RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 SNX12Q9UMY4 172 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 SHOC2Q9UQ13 582 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 ZNF148Q9UQR1 794 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 AAR2Q9Y312 384 aaKnown RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 ZNF711Q9Y462 761 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 GOLGA4Q13439 2230 aaKnown RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 CES2O00748 559 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 TNFRSF10CO14798 259 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 FLRT2O43155 660 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 PIAS2O75928 621 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 FUCA1P04066 466 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 FGF1P05230 155 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 CEACAM1P13688 526 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 TSHRP16473 764 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 DGKAP23743 735 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 RPL22P35268 128 aaKnown RBP9.61□□□□□ -0.87
SRP54-210ENST00000556380 KCNJ1P48048 391 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 THOP1P52888 689 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 HNRNPKP61978 463 aaKnown RBP eCLIP9.61□□□□□ -0.87
SRP54-210ENST00000556380 PTK2BQ14289 1009 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 PRPSAP1Q14558 356 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 CYP1B1Q16678 543 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 ALG11Q2TAA5 492 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 HENMT1Q5T8I9 393 aaKnown RBP9.61□□□□□ -0.87
SRP54-210ENST00000556380 ARHGEF18Q6ZSZ5 1173 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 GLRX5Q86SX6 157 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 PRUNE1Q86TP1 453 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 SLC25A41Q8N5S1 370 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 ACTRT1Q8TDG2 376 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 OR1E3Q8WZA6 343 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 AP2M1Q96CW1 435 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 COX14Q96I36 57 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 TBATAQ96M53 351 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 PPP1R2P1Q96PQ5 205 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 FICDQ9BVA6 458 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 RIOK2Q9BVS4 552 aaKnown RBP9.61□□□□□ -0.87
SRP54-210ENST00000556380 TCEAL2Q9H3H9 227 aaPredicted RBP9.61□□□□□ -0.87
SRP54-210ENST00000556380 FAM83DQ9H4H8 585 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 WDR26Q9H7D7 661 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 ETNK1Q9HBU6 452 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 FGF22Q9HCT0 170 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 HOMER3Q9NSC5 361 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 DNAJC28Q9NX36 388 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 DGKBQ9Y6T7 804 aa9.61□□□□□ -0.87
SRP54-210ENST00000556380 TPRP12270 2363 aaKnown RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 TMEM131Q92545 1883 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 FADS2P1A8MWK0 482 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 CACNB4O00305 520 aaPredicted RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 TRIM38O00635 465 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 ZNF185O15231 689 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 USP12O75317 370 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 AP2A1O95782 977 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 F12P00748 615 aaPredicted RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 CEACAM5P06731 702 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 ZSCAN5DPP0CG00 497 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 MYCLP1P12525 358 aaPredicted RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 BPIP17213 487 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 MSNP26038 577 aaKnown RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 HMGCLP35914 325 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 GRK6P43250 576 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 NOVA1P51513 510 aaKnown RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 DCDC1P59894 354 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 SRP54P61011 504 aaKnown RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 GNG11P61952 73 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 CDK3Q00526 305 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 SPARCL1Q14515 664 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 FAXCQ5TGI0 409 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 PSAPL1Q6NUJ1 521 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 TTC27Q6P3X3 843 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 ENPP7Q6UWV6 458 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 DGLUCYQ7Z3D6 616 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 HEATR4Q86WZ0 1026 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 PHACTR4Q8IZ21 702 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 RBFAQ8N0V3 343 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 C17orf53Q8N3J3 647 aaPredicted RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 GPR26Q8NDV2 337 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 CCHCR1Q8TD31 782 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 DTX3LQ8TDB6 740 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 RHBDD1Q8TEB9 315 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 SETD7Q8WTS6 366 aaKnown RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 TSACCQ96A04 125 aaPredicted RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 SCARF2Q96GP6 870 aaPredicted RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 WDR92Q96MX6 357 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 FRMD8Q9BZ67 464 aaPredicted RBP9.6□□□□□ -0.87
SRP54-210ENST00000556380 GPR63Q9BZJ6 419 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 CLPBQ9H078 707 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 CDH19Q9H159 772 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 SMARCAL1Q9NZC9 954 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 PKD2L2Q9NZM6 624 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 HACD3Q9P035 362 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 IL17CQ9P0M4 197 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 TMPRSS11EQ9UL52 423 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 SLC17A4Q9Y2C5 497 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 NEU2Q9Y3R4 380 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 CSNK1G3Q9Y6M4 447 aa9.6□□□□□ -0.87
SRP54-210ENST00000556380 KNTC1P50748 2209 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 SPAARA0A1B0GVQ0 90 aa9.59□□□□□ -0.87
SRP54-210ENST00000556380 LMO7DNF2Z398 122 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms