RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MTA1Q13330 715 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ADAM9Q13443 819 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 NFATC4Q14934 902 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 STK38Q15208 465 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 KLHL40Q2TBA0 621 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ALFQ53S48 1182 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ZNF805Q5CZA5 627 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 SHC4Q6S5L8 630 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM270Q6UE05 265 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CLEC17AQ6ZS10 378 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TIPARPQ7Z3E1 657 aaKnown RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TAF8Q7Z7C8 310 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 SETD3Q86TU7 594 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CDH24Q86UP0 819 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ZC3H18Q86VM9 953 aaKnown RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 C17orf82Q86X59 251 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 IRF2BP1Q8IU81 584 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CILP2Q8IUL8 1156 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 HSCBQ8IWL3 235 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 PCDH20Q8N6Y1 951 aaKnown RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 UBR7Q8N806 425 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 OR4D9Q8NGE8 314 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CXorf40AQ8TE69 158 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 RTP4Q96DX8 246 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TCTN2Q96GX1 697 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TEFMQ96QE5 360 aaKnown RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 MED15Q96RN5 788 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 APOOQ9BUR5 198 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TRIT1Q9H3H1 467 aaKnown RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 DPEP2Q9H4A9 486 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ZSCAN16Q9H4T2 348 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 EXOC1Q9NV70 894 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 OCIAD1Q9NX40 245 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 HECAQ9UBI9 543 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 KLQ9UEF7 1012 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ERRFI1Q9UJM3 462 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TLK1Q9UKI8 766 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 SHANK1Q9Y566 2161 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 NF1P21359 2839 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 SVILO95425 2214 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 SYNJ2BP-COX16A0A087WUM0 186 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 RHPN2P1A8MT19 583 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 PPP6R2O75170 966 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 RFPL1O75677 317 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ZMPSTE24O75844 475 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ADCY5O95622 1261 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 PGRP06401 933 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 SYT1P21579 422 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 TBXAS1P24557 533 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 RPL13P26373 211 aaKnown RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 GKP32189 559 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 GPD2P43304 727 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 GPR3P46089 330 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 LIG3P49916 1009 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 SERPINH1P50454 418 aaKnown RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 MRPL49Q13405 166 aaKnown RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 SQSTM1Q13501 440 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 NR1D2Q14995 579 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 IRF4Q15306 451 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 TAF5Q15542 800 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 TSNAXIP1Q2TAA8 658 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 CBWD6Q4V339 395 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 CBWD3Q5JTY5 395 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 CBWD5Q5RIA9 395 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ANKS6Q68DC2 871 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 KCTD16Q68DU8 428 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 SPECC1LQ69YQ0 1117 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 RETSATQ6NUM9 610 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 SYDE1Q6ZW31 735 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 KDELC2Q7Z4H8 507 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM110Q86TL2 294 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 TTC7BQ86TV6 843 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 FAM129CQ86XR2 697 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 GRAMD1CQ8IYS0 662 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 NRSN1Q8IZ57 195 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 BMPERQ8N8U9 685 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 OR7D4Q8NG98 312 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 VOPP1Q96AW1 172 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ISG20Q96AZ6 181 aaKnown RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ZPBPQ9BS86 351 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 SPON2Q9BUD6 331 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 THAP9Q9H5L6 903 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ZDHHC6Q9H6R6 413 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 FAM204AQ9H8W3 233 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ST7Q9NRC1 585 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 DDIT4Q9NX09 232 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 COX16Q9P0S2 106 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 COQ4Q9Y3A0 265 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 PCDHB4Q9Y5E5 795 aa6.88□□□□□ -1.31
ATXN3-236ENST00000556220 DIDO1Q9BTC0 2240 aaKnown RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ARHGEF17Q96PE2 2063 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-236ENST00000556220 ILVBLA1L0T0 632 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 DRGXA6NNA5 263 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 B4DGG1 531 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 HNRNPRO43390 633 aaKnown RBP6.87□□□□□ -1.31
ATXN3-236ENST00000556220 CUTAO60888 179 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 POP4O95707 220 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms