RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MCIDASD6RGH6 385 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SIN3BO75182 1162 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SLC26A3P40879 764 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ARFIP1P53367 373 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 RHAGQ02094 409 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 HEPACAMQ14CZ8 416 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SPATS1Q496A3 300 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 KLHL26Q53HC5 615 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 EIPR1Q53HC9 387 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CPNE9Q8IYJ1 553 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 IZUMO1Q8IYV9 350 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 UNC5BQ8IZJ1 945 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ZBTB2Q8N680 514 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 OR2T12Q8NG77 320 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 HDAC10Q969S8 669 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 FAM136AQ96C01 138 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ZHX1-C8orf76Q96EF9 292 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 NTPCRQ9BSD7 190 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PAIP1Q9H074 479 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CLK4Q9HAZ1 481 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ING4Q9UNL4 249 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PCDHB9Q9Y5E1 797 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PTPRJQ12913 1337 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 UGT2B17O75795 530 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PRKAR1AP10644 381 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 GOT1P17174 413 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 OR1D2P34982 312 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 RFC2P35250 354 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 IDH2P48735 452 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ERFP50548 548 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 RPL19P84098 196 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PSRC1Q6PGN9 363 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SVOPLQ8N434 492 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CHCHD4Q8N4Q1 142 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PSKH2Q96QS6 385 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 RBM4BQ9BQ04 359 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 RBM4Q9BWF3 364 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 C1QTNF1Q9BXJ1 281 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 FAM83DQ9H4H8 585 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 EXO5Q9H790 373 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ELOVL2Q9NXB9 296 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 MAN2B2Q9Y2E5 1009 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PPLO60437 1756 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 NPHS1O60500 1241 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CLDN9O95484 217 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SLC35G6P0C7Q6 338 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 TACR2P21452 398 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ATP12AP54707 1039 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 MANFP55145 182 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 DLG4P78352 724 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SMCO1Q147U7 214 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SLC1A5Q15758 541 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 RGS21Q2M5E4 152 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 HKDC1Q2TB90 917 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 KLHL17Q6TDP4 642 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 C11orf74Q86VG3 221 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CPSF7Q8N684 471 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 GRIN3AQ8TCU5 1115 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ITM2CQ9NQX7 267 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 NUDT5Q9UKK9 219 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PSMD13Q9UNM6 376 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 TGFB1I1O43294 461 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CBFA2T3O75081 653 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PEX11AO75192 247 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CST1P01037 141 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 PFKMP08237 780 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 UROSP10746 265 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 GRIA3P42263 894 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 HCAR3P49019 387 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 RIPK1Q13546 671 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 EARS2Q5JPH6 523 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 TCHHL1Q5QJ38 904 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 CEP68Q76N32 757 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 GALNT13Q8IUC8 556 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 ZC3H7AQ8IWR0 971 aaKnown RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 SLC38A4Q969I6 547 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 COX4I2Q96KJ9 171 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 NSMCE3Q96MG7 304 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 HAPLN3Q96S86 360 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 TMEM175Q9BSA9 504 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 LRTM1Q9HBL6 345 aa10.69□□□□□ -0.7
ACTN1-216ENST00000556083 GPN1Q9HCN4 374 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-216ENST00000556083 TCRBV9S1A1TA0A576 114 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 DUXAA6NLW8 204 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 OR10H3O60404 316 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 C22orf31O95567 290 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CBX5P45973 191 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 OMPP47874 163 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 LCP2Q13094 533 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 QPRTQ15274 297 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CERCAMQ5T4B2 595 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 GPR158Q5T848 1215 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 MED27Q6P2C8 311 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 ADGRG6Q86SQ4 1221 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 MAB21L3Q8N8X9 362 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 C11orf65Q8NCR3 313 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 SMG7Q92540 1137 aaKnown RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 HEPHQ9BQS7 1158 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 C14orf105Q9NVL8 296 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms