RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 PCDH1Q08174 1060 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 ZNF543Q08ER8 600 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 GRSF1Q12849 480 aaKnown RBP eCLIP10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 DPYSL3Q14195 570 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 CDC42EP5Q6NZY7 148 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 KCTD8Q6ZWB6 473 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 SLC9B2Q86UD5 537 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 ZNF354CQ86Y25 554 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 CBWD2Q8IUF1 395 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 NIM1KQ8IY84 436 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 CPXCR1Q8N123 301 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 FEZF2Q8TBJ5 459 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 TFAP2CQ92754 450 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 TRIM63Q969Q1 353 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 OR52B2Q96RD2 323 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 RNPEPQ9H4A4 650 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 FAM96AQ9H5X1 160 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 C20orf96Q9NUD7 363 aaPredicted RBP10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 KLHL9Q9P2J3 617 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 SERPINB13Q9UIV8 391 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
EFCAB11-208ENST00000555872 RGSL1A5PLK6 1076 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 CLIC3O95833 236 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 IFNA16P05015 189 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 MATN1P21941 496 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 GABRB2P47870 512 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 COPZ1P61923 177 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 GABPAQ06546 454 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 CACNB2Q08289 660 aaPredicted RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ART3Q13508 389 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 DOC2AQ14183 400 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 GRM7Q14831 915 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 GRIK4Q16099 956 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 INAVAQ3KP66 663 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 HMBOX1Q6NT76 420 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 TERB1Q8NA31 727 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 TP53I13Q8NBR0 393 aaPredicted RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 LRRC20Q8TCA0 184 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ZC3H10Q96K80 434 aaKnown RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 HSD17B14Q9BPX1 270 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 CLSTN3Q9BQT9 956 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 GON7Q9BXV9 100 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 PCDHAC1Q9H158 963 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 UNC93B1Q9H1C4 597 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 MAGEE1Q9HCI5 957 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 MTMR4Q9NYA4 1195 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 KLQ9UEF7 1012 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 DNMT3LQ9UJW3 386 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 MYH9P35579 1960 aaKnown RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 PMS2P1A4D2B8 440 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 SOCS2O14508 198 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 NEMP1O14524 444 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 NUAK1O60285 661 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 TSC22D2O75157 780 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 RBBP9O75884 186 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 PDGFRAP16234 1089 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 HTR7P34969 479 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 KCNJ10P78508 379 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ALDH6A1Q02252 535 aaKnown RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 KCNAB2Q13303 367 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 PGBD3Q8N328 593 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ANKFN1Q8N957 763 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 FBXL13Q8NEE6 735 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 MAPK15Q8TD08 544 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 MTFMTQ96DP5 389 aaKnown RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 B3GALT6Q96L58 329 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ZNF347Q96SE7 839 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 FRMD8P1Q9BZ68 369 aaPredicted RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 GORASP2Q9H8Y8 452 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 SMOXQ9NWM0 555 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 SYBUQ9NX95 663 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 GDAP2Q9NXN4 497 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ADA2Q9NZK5 511 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 AGO1Q9UL18 857 aaKnown RBP10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 EMCNQ9ULC0 261 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 SNX7Q9UNH6 387 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ACOT9Q9Y305 439 aa10.33□□□□□ -0.76
EFCAB11-208ENST00000555872 ZNF839A8K0R7 811 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 FAM155AB1AL88 458 aaPredicted RBP10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 CLDN25C9JDP6 229 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 MEIS2O14770 477 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 MSI1O43347 362 aaKnown RBP10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 FZD6O60353 706 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 CDK14O94921 469 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 G0S2P27469 103 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 ARNTP27540 789 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 NOVP48745 357 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 MAN2A2P49641 1150 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 ABCE1P61221 599 aaKnown RBP10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 PCLAFQ15004 111 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 TAF5Q15542 800 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 DGKDQ16760 1214 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 FBXO48Q5FWF7 155 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 PDSS1Q5T2R2 415 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 CYB5R2Q6BCY4 276 aa10.32□□□□□ -0.76
EFCAB11-208ENST00000555872 TRMT10BQ6PF06 316 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms