RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CEP41Q9BYV8 373 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 FOXP3Q9BZS1 431 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 BRD8Q9H0E9 1235 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 CDH19Q9H159 772 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 SEPT10Q9P0V9 454 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 ATXN7L1Q9ULK2 861 aaPredicted RBP13.74□□□□□ -0.21
PCNX4-209ENST00000555569 TMEM98Q9Y2Y6 226 aa13.74□□□□□ -0.21
PCNX4-209ENST00000555569 PLD2O14939 933 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 INPP4BO15327 924 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 TNFSF15O95150 251 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 NOP2P46087 812 aaKnown RBP13.73□□□□□ -0.21
PCNX4-209ENST00000555569 SPINT3P49223 89 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
PCNX4-209ENST00000555569 DYNLT1P63172 113 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 GALNT3Q14435 633 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 PYCR3Q53H96 274 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 FAM182AQ5T1J6 154 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 MARK2Q7KZI7 788 aaKnown RBP13.73□□□□□ -0.21
PCNX4-209ENST00000555569 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 CLEC14AQ86T13 490 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 NT5DC3Q86UY8 548 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 FBXO39Q8N4B4 442 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 EXD1Q8NHP7 514 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 CCHCR1Q8TD31 782 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 IMP4Q96G21 291 aaKnown RBP13.73□□□□□ -0.21
PCNX4-209ENST00000555569 COX14Q96I36 57 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 FCRL3Q96P31 734 aaPredicted RBP13.73□□□□□ -0.21
PCNX4-209ENST00000555569 AGAP3Q96P47 875 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 WDR24Q96S15 920 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 UBL7Q96S82 380 aaPredicted RBP13.73□□□□□ -0.21
PCNX4-209ENST00000555569 DPH1Q9BZG8 443 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 PKD2L2Q9NZM6 624 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 PLEKHM1Q9Y4G2 1056 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 ST14Q9Y5Y6 855 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 BPTFQ12830 3046 aa13.73□□□□□ -0.21
PCNX4-209ENST00000555569 FASNP49327 2511 aaKnown RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 RGSL1A5PLK6 1076 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 RHPN2P1A8MT19 583 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 KLK10O43240 276 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 PSTPIP1O43586 416 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 ASMTLO95671 621 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 ECEL1O95672 775 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 ITGA2BP08514 1039 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 UGT1A5P35504 534 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 ACTR1BP42025 376 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 CDKN2BP42772 138 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 UCNP55089 124 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 ACTR1AP61163 376 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 B4GALNT1Q00973 533 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 ZFP36L1Q07352 338 aaKnown RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 BIRC2Q13490 618 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 TFDP2Q14188 446 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 HENMT1Q5T8I9 393 aaKnown RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 B4GALNT4Q76KP1 1039 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 ZNF438Q7Z4V0 828 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 GALNT13Q8IUC8 556 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 NAGSQ8N159 534 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 PATE1Q8WXA2 126 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 BBC3Q96PG8 261 aaPredicted RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 SLC25A51Q9H1U9 297 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 FAM83DQ9H4H8 585 aa13.72□□□□□ -0.21
PCNX4-209ENST00000555569 CNOT6Q9ULM6 557 aaKnown RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 OAS3Q9Y6K5 1087 aaKnown RBP13.72□□□□□ -0.21
PCNX4-209ENST00000555569 LOC400499M0QZD8 3231 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 ZW10O43264 779 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 B4GAT1O43505 415 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 LCA5LO95447 670 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 NR2C2P49116 596 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 TMPRSS3P57727 454 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 OR1D5P58170 312 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 CXADRP78310 365 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 NR1D2Q14995 579 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 SLC14A2Q15849 920 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 PCSK7Q16549 785 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 TAZQ16635 292 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 MAP9Q49MG5 647 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 TEX44Q53QW1 395 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 SPOCD1Q6ZMY3 1216 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 LYSMD3Q7Z3D4 306 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 GPR155Q7Z3F1 870 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 KDELC2Q7Z4H8 507 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 SLITRK4Q8IW52 837 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 CCDC170Q8IYT3 715 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 TADA1Q96BN2 335 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 TRIB3Q96RU7 358 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 GLOD4Q9HC38 313 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 VPS18Q9P253 973 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 PCDHA13Q9Y5I0 950 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 ALG6Q9Y672 507 aa13.71□□□□□ -0.21
PCNX4-209ENST00000555569 A0A0A6YYK5 440 aaPredicted RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 EIF4E1BA6NMX2 242 aaKnown RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 FADS2P1A8MWK0 482 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 CST8O60676 142 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 DNAJC6O75061 913 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 CPNE6O95741 557 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
PCNX4-209ENST00000555569 PIRTP0C851 137 aa13.7□□□□□ -0.22
PCNX4-209ENST00000555569 JMJD7P0C870 316 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms