RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ORAI3Q9BRQ5 295 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ZDHHC5Q9C0B5 715 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ARNT2Q9HBZ2 717 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 XAB2Q9HCS7 855 aaKnown RBP10.88□□□□□ -0.67
SHMT2-218ENST00000555213 SEMA4GQ9NTN9 838 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 TMEM74BQ9NUR3 256 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 RABGEF1Q9UJ41 708 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 SLC6A14Q9UN76 642 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 COQ6Q9Y2Z9 468 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 PKP3Q9Y446 797 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 HS3ST3A1Q9Y663 406 aa10.88□□□□□ -0.67
SHMT2-218ENST00000555213 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.88□□□□□ -0.67
SHMT2-218ENST00000555213 ABCA7Q8IZY2 2146 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 SDR42E2A6NKP2 422 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 TCEA3O75764 348 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CLDN7O95471 211 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 ACSL3O95573 720 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CER1O95813 267 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 ABHD2P08910 425 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 C1SP09871 688 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 ZNF806P0C7X5 589 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 TSHRP16473 764 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 TPH1P17752 444 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 MGAT1P26572 445 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 HTR1BP28222 390 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CSNK1EP49674 416 aaKnown RBP10.87□□□□□ -0.67
SHMT2-218ENST00000555213 THOP1P52888 689 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CRADDP78560 199 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 SEPT6Q14141 434 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 TAF1AQ15573 450 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CCDC6Q16204 474 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 WSCD2Q2TBF2 565 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 AASDHQ4L235 1098 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CCDC38Q502W7 563 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 TNFAIP8L3Q5GJ75 292 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CERCAMQ5T4B2 595 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 RAET1GQ6H3X3 334 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 GCNT7Q6ZNI0 430 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 C3orf62Q6ZUJ4 267 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 Q6ZVL8 140 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 ASCL5Q7RTU5 278 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 DCP2Q8IU60 420 aaKnown RBP10.87□□□□□ -0.67
SHMT2-218ENST00000555213 TP53I13Q8NBR0 393 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-218ENST00000555213 C1orf216Q8TAB5 229 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 PYROXD1Q8WU10 500 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CENPTQ96BT3 561 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 AP2M1Q96CW1 435 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 LRRC39Q96DD0 335 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 KLHDC7BQ96G42 594 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 FCRL3Q96P31 734 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-218ENST00000555213 SMIM14Q96QK8 99 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 WDR26Q9H7D7 661 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 EBF2Q9HAK2 575 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 TMBIM4Q9HC24 238 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 EURLQ9NYK6 297 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHMT2-218ENST00000555213 CHMP2BQ9UQN3 213 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 SPO11Q9Y5K1 396 aa10.87□□□□□ -0.67
SHMT2-218ENST00000555213 A0A1B0GVT2 93 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 GOLGA8CPA6NN73 597 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 TLR4O00206 839 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 CACNB4O00305 520 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 RAD51BO15315 384 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 STX7O15400 261 aaKnown RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 THEGLP0DJG4 465 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 LPOP22079 712 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 KELP23276 732 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 IGFALSP35858 605 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 HMGCLP35914 325 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 NPY2RP49146 381 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 SPINT3P49223 89 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 CLDN2P57739 230 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 SESN2P58004 480 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 DCDC1P59894 354 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 YPEL5P62699 121 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 PTSQ03393 145 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 DPTQ07507 201 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 PTK2BQ14289 1009 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 PTPRRQ15256 657 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 TTMPQ5BVD1 217 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 STEAP4Q687X5 459 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 ESRP1Q6NXG1 681 aaKnown RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 UNC5AQ6ZN44 842 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 PRR23CQ6ZRP0 262 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 Q6ZSR6 202 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 CEP128Q6ZU80 1094 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 CYS1Q717R9 158 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 ABI3BPQ7Z7G0 1075 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 OXR1Q8N573 874 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 PPHLN1Q8NEY8 458 aaKnown RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 BRSK1Q8TDC3 778 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 PLEKHG4BQ96PX9 1271 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 KLF6Q99612 283 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 ZSCAN5AQ9BUG6 496 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 FAM83DQ9H4H8 585 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 CAPN10Q9HC96 672 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 SMYD2Q9NRG4 433 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 PHPT1Q9NRX4 125 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 SYBUQ9NX95 663 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 MOCS1Q9NZB8 636 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms