RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SCG3Q8WXD2 468 aaKnown RBP10.56□□□□□ -0.72
TMEM260-206ENST00000555046 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 TBATAQ96M53 351 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 CDC6Q99741 560 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 ZSCAN5AQ9BUG6 496 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 TUBB2BQ9BVA1 445 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 DUSP23Q9BVJ7 150 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 MBNL1Q9NR56 388 aaKnown RBP10.56□□□□□ -0.72
TMEM260-206ENST00000555046 EVA1BQ9NVM1 165 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 DNAJC28Q9NX36 388 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 SPASTQ9UBP0 616 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 SHOC2Q9UQ13 582 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 CA5BQ9Y2D0 317 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 ZNF711Q9Y462 761 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 SLCO1B1Q9Y6L6 691 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 CSNK1G3Q9Y6M4 447 aa10.56□□□□□ -0.72
TMEM260-206ENST00000555046 NUMA1Q14980 2115 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 KNL1Q8NG31 2342 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 GPR89AB7ZAQ6 455 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 H0Y8X5 98 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 CCDC188H7C350 402 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 STX7O15400 261 aaKnown RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 PHF2O75151 1096 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 SUN1O94901 812 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 RASGRP1O95267 797 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 ECEL1O95672 775 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 APRTP07741 180 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 GPR89BP0CG08 455 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 ALPPL2P10696 532 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 MYCLP1P12525 358 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 CTSEP14091 401 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 JUNDP17535 347 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 RPL22P35268 128 aaKnown RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 IGFALSP35858 605 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 HADHAP40939 763 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 GRK6P43250 576 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 KCNJ1P48048 391 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 KIAA1024LP59773 190 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 BNC1Q01954 994 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 CDH17Q12864 832 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 SEMA5AQ13591 1074 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 FZD2Q14332 565 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 SKIDA1Q1XH10 827 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 ARMC3Q5W041 872 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 KCTD11Q693B1 232 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 ENPP7Q6UWV6 458 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 ADAMTSL4Q6UY14 1074 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 PPP1R21Q6ZMI0 780 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 SYDE1Q6ZW31 735 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 NLRP9Q7RTR0 991 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 LYSMD3Q7Z3D4 306 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 SPATS2Q86XZ4 545 aaKnown RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 CREG2Q8IUH2 290 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 TRAM1L1Q8N609 369 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 OR56A4Q8NGH8 313 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 HIC2Q96JB3 615 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 WDR92Q96MX6 357 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 PLEKHG4BQ96PX9 1271 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 RIOK2Q9BVS4 552 aaKnown RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 TEX101Q9BY14 249 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 ABCG8Q9H221 673 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 FSCN3Q9NQT6 498 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 EIF2B3Q9NR50 452 aaKnown RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 GPR27Q9NS67 375 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 NCKIPSDQ9NZQ3 722 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 NFKBIL1Q9UBC1 381 aaPredicted RBP10.55□□□□□ -0.72
TMEM260-206ENST00000555046 KLQ9UEF7 1012 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
TMEM260-206ENST00000555046 PLXND1Q9Y4D7 1925 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 GOLGA8CPA6NN73 597 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 F5H423 210 aaPredicted RBP10.54□□□□□ -0.72
TMEM260-206ENST00000555046 NDC80O14777 642 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 ZNF185O15231 689 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 KRT14P02533 472 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 PIRTP0C851 137 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 CEACAM1P13688 526 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 PLA2G2AP14555 144 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 NME1P15531 152 aaKnown RBP10.54□□□□□ -0.72
TMEM260-206ENST00000555046 NPY2RP49146 381 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 SRP54P61011 504 aaKnown RBP10.54□□□□□ -0.72
TMEM260-206ENST00000555046 BASP1P80723 227 aaKnown RBP10.54□□□□□ -0.72
TMEM260-206ENST00000555046 CDK3Q00526 305 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 ITGA9Q13797 1035 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 ELOCQ15369 112 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 PPP1R7Q15435 360 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 CACNA1EQ15878 2313 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 LVRNQ6Q4G3 990 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 LAYNQ6UX15 382 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 SYT10Q6XYQ8 523 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 PCGF5Q86SE9 256 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 FSTL5Q8N475 847 aaPredicted RBP10.54□□□□□ -0.72
TMEM260-206ENST00000555046 RHBDD1Q8TEB9 315 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 SAP25Q8TEE9 199 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 SETD7Q8WTS6 366 aaKnown RBP10.54□□□□□ -0.72
TMEM260-206ENST00000555046 SPATA16Q9BXB7 569 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
TMEM260-206ENST00000555046 BFARQ9NZS9 450 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms