RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CACNG1Q06432 222 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 RCN2Q14257 317 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 TRIM68Q6AZZ1 485 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 EPGNQ6UW88 154 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 MTDHQ86UE4 582 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 TSPAN33Q86UF1 283 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ALYREFQ86V81 257 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 PDCD6IPQ8WUM4 868 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 MYLIPQ8WY64 445 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ERP27Q96DN0 273 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 TMEM237Q96Q45 408 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CDH19Q9H159 772 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ZNF385DQ9H6B1 395 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CERS4Q9HA82 394 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 HPS4Q9NQG7 708 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ARHGEF3Q9NR81 526 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 DZANK1Q9NVP4 752 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CPSF2Q9P2I0 782 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 LNPEPQ9UIQ6 1025 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CDH22Q9UJ99 828 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 MID2Q9UJV3 735 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 DCTN4Q9UJW0 460 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 DNAJC16Q9Y2G8 782 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 LINC01565O15544 149 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SPINT1O43278 529 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 GRID2O43424 1007 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 RASSF9O75901 435 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CLDN7O95471 211 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CHRNGP07510 517 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SRPRAP08240 638 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 CCDC166P0CW27 439 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ADH5P11766 374 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 GM2AP17900 193 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SERPINB3P29508 390 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 VIPR2P41587 438 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 IDH3AP50213 366 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 HYAL1Q12794 435 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 KRT72Q14CN4 511 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 OR4D1Q15615 310 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 PREPLQ4J6C6 727 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 RNF187Q5TA31 235 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 SYCE2Q6PIF2 218 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CRLF3Q8IUI8 442 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 RHEBL1Q8TAI7 183 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CD200R1Q8TD46 325 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ZNF483Q8TF39 744 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 UTP4Q969X6 686 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 DERL2Q9GZP9 239 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SUV39H2Q9H5I1 410 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 FAM96AQ9H5X1 160 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 IL26Q9NPH9 171 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 HECAQ9UBI9 543 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 HEY2Q9UBP5 337 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SLC25A13Q9UJS0 675 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 TMPRSS11EQ9UL52 423 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 COMMD10Q9Y6G5 202 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 IGLV3-16A0A075B6K0 115 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SLC9A3R1O14745 358 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 SRP72O76094 671 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 ARSAP15289 507 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SAT1P21673 171 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SERPINA4P29622 427 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 HK2P52789 917 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 PTPN5P54829 565 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 AQP5P55064 265 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 FCHO2Q0JRZ9 810 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 CSHL1Q14406 222 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 GPR26Q8NDV2 337 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 MAPK15Q8TD08 544 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 DTX3LQ8TDB6 740 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 HCAR2Q8TDS4 363 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 N4BP2L2Q92802 583 aaPredicted RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 FGF13Q92913 245 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 LRRC37BQ96QE4 947 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 S1PR5Q9H228 398 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 GSTO2Q9H4Y5 243 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ECT2Q9H8V3 914 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 ZFYVE1Q9HBF4 777 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 TNFRSF12AQ9NP84 129 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 SAR1AQ9NR31 198 aa8.86□□□□□ -0.99
TDP1-210ENST00000554976 DUS2Q9NX74 493 aaKnown RBP8.86□□□□□ -0.99
TDP1-210ENST00000554976 A0A0G2JND7 137 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TTC34A8MYJ7 566 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 ZBTB14O43829 449 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 ATP5F1P24539 256 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 SERPINB5P36952 375 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TTPAP49638 278 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 GALNT1Q10472 559 aaPredicted RBP8.85□□□□□ -0.99
TDP1-210ENST00000554976 RALGDSQ12967 914 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 ANKRD54Q6NXT1 300 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 VITQ6UXI7 678 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TMC5Q6UXY8 1006 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 Q6ZVU0 165 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 TTC7BQ86TV6 843 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 EFHBQ8N7U6 833 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 SMARCD2Q92925 531 aa8.85□□□□□ -0.99
TDP1-210ENST00000554976 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms