RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SNX15Q9NRS6 342 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 SLC25A13Q9UJS0 675 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 FCF1Q9Y324 198 aaKnown RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 CXorf51AA0A1B0GTR3 108 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 EPHX1P07099 455 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 RALBP11234 206 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 HOXB2P14652 356 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 CD68P34810 354 aaPredicted RBP17.36■□□□□ 0.37
SHOX-204ENST00000554971 ABCE1P61221 599 aaKnown RBP17.36■□□□□ 0.37
SHOX-204ENST00000554971 TSNAXIP1Q2TAA8 658 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 PDPK2PQ6A1A2 396 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 NET1Q7Z628 596 aaPredicted RBP17.36■□□□□ 0.37
SHOX-204ENST00000554971 STRA8Q7Z7C7 330 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 TTC7BQ86TV6 843 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 DCLK2Q8N568 766 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 ATPAF2Q8N5M1 289 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 PTCD2Q8WV60 388 aaKnown RBP17.36■□□□□ 0.37
SHOX-204ENST00000554971 MCMBPQ9BTE3 642 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 LRFN3Q9BTN0 628 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 KIFC1Q9BW19 673 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 C20orf27Q9GZN8 174 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 CXorf56Q9H5V9 222 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 DNAJC16Q9Y2G8 782 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 SPAG17Q6Q759 2223 aa17.36■□□□□ 0.37
SHOX-204ENST00000554971 ENTPD5O75356 428 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 ANXA9O76027 345 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 RPSAP08865 295 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 CLNS1AP54105 237 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 IL10RBQ08334 325 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 UGP2Q16851 508 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 TRMT5Q32P41 509 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 C9orf64Q5T6V5 341 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 METTL21CQ5VZV1 264 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 Q6ZVU0 165 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 TRMT11Q7Z4G4 463 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 CLEC14AQ86T13 490 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 STMN2Q93045 179 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 NAF1Q96HR8 494 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 MLPHQ9BV36 600 aaPredicted RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 CEP41Q9BYV8 373 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 MKRN2Q9H000 416 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 STX18Q9P2W9 335 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 ABCA7Q8IZY2 2146 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 TM7SF2O76062 418 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 TMCC1O94876 653 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 PRKCGP05129 697 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 COL6A2P12110 1019 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 ST8SIA6P61647 398 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 SLC10A7Q0GE19 358 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 MPP3Q13368 585 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 CAMK2GQ13555 558 aaPredicted RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 TAF11Q15544 211 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 KHDC1Q4VXA5 237 aaKnown RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 INO80DQ53TQ3 878 aaPredicted RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 C16orf46Q6P387 395 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 C10orf107Q8IVU9 208 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 DTWD2Q8NBA8 298 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 PRR11Q96HE9 360 aaPredicted RBP17.35■□□□□ 0.37
SHOX-204ENST00000554971 ZNF570Q96NI8 536 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 IER2Q9BTL4 223 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 SP110Q9HB58 689 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 PRSS16Q9NQE7 514 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 TMEM216Q9P0N5 145 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 ARMCX1Q9P291 453 aa17.35■□□□□ 0.37
SHOX-204ENST00000554971 GPR179Q6PRD1 2367 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 K7ESF4 209 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 MUSKO15146 869 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 ATG13O75143 517 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 SIN3BO75182 1162 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 CIB2O75838 187 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 KITP10721 976 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 NFKB1P19838 968 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 PRDX6P30041 224 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 VHLP40337 213 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 PTDSS1P48651 473 aaKnown RBP17.34■□□□□ 0.37
SHOX-204ENST00000554971 COPAP53621 1224 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 CYTH1Q15438 398 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 EOGTQ5NDL2 527 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 C22orf39Q6P5X5 142 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 KCNMB4Q86W47 210 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 TREML1Q86YW5 311 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 C1orf210Q8IVY1 113 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 OR2A12Q8NGT7 310 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 AGAP3Q96P47 875 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 HHIPQ96QV1 700 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 FCRL5Q96RD9 977 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 SLC6A17Q9H1V8 727 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 TNKS2Q9H2K2 1166 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 SPATA6Q9NWH7 488 aaPredicted RBP17.34■□□□□ 0.37
SHOX-204ENST00000554971 UBA2Q9UBT2 640 aaPredicted RBP17.34■□□□□ 0.37
SHOX-204ENST00000554971 FANCMQ8IYD8 2048 aa17.34■□□□□ 0.37
SHOX-204ENST00000554971 F5H423 210 aaPredicted RBP17.33■□□□□ 0.37
SHOX-204ENST00000554971 SNUPNO95149 360 aaKnown RBP17.33■□□□□ 0.37
SHOX-204ENST00000554971 PSMG1O95456 288 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 ENO1P06733 434 aaKnown RBP17.33■□□□□ 0.37
SHOX-204ENST00000554971 TDGF1P13385 188 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 KCNA4P22459 653 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 SLC34A1Q06495 639 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 ZBTB17Q13105 803 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms