RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ARSAP15289 507 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 SERPINB6P35237 376 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 ABCG1P45844 678 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 IDH3AP50213 366 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 COG7P83436 770 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PRKAA1Q13131 559 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 BMPR2Q13873 1038 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 MAP7Q14244 749 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 VEPH1Q14D04 833 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 MAPRE1Q15691 268 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 DUOXA1Q1HG43 343 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 SDHAF4Q5VUM1 108 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 LYSMD4Q5XG99 296 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 CASC4Q6P4E1 433 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 TRMT10BQ6PF06 316 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 EPGNQ6UW88 154 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 BNIPLQ7Z465 357 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 TMEM135Q86UB9 458 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PIGZQ86VD9 579 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 AFAP1L2Q8N4X5 818 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 CPSF7Q8N684 471 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
SRP54-205ENST00000554803 CEP76Q8TAP6 659 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 DTX3LQ8TDB6 740 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 AZIN2Q96A70 460 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PIWIL1Q96J94 861 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 FAR2Q96K12 515 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 CAMK1GQ96NX5 476 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 MECRQ9BV79 373 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 SLC46A2Q9BY10 475 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 IL22Q9GZX6 179 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 CAPN10Q9HC96 672 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 CSNK1G1Q9HCP0 422 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 FSCN3Q9NQT6 498 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 DNAAF2Q9NVR5 837 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 EMCNQ9ULC0 261 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 RAB26Q9ULW5 256 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PADI4Q9UM07 663 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PSMD13Q9UNM6 376 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 SLC27A5Q9Y2P5 690 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 RAP2CQ9Y3L5 183 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PCDHB9Q9Y5E1 797 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PCDHB5Q9Y5E4 795 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 TEX15Q9BXT5 2789 aa11.15□□□□□ -0.63
SRP54-205ENST00000554803 ANKRD33BA6NCL7 494 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 MAP3K13O43283 966 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 DENRO43583 198 aaKnown RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 SH3BP5O60239 455 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 HSPA4LO95757 839 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 F9P00740 461 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 LCP1P13796 627 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 ITPKAP23677 461 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 CDC25CP30307 473 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 PEX19P40855 299 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 GBE1Q04446 702 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 SLC14A1Q13336 389 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 PRPSAP1Q14558 356 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 MAPRE2Q15555 327 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 ANKRD20A4Q4UJ75 823 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 LIN52Q52LA3 116 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 OGFRL1Q5TC84 451 aaPredicted RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 CLEC14AQ86T13 490 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 SCN4BQ8IWT1 228 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 KLHDC8BQ8IXV7 354 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 CMTM8Q8IZV2 173 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 MARVELD2Q8N4S9 558 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 CNTD1Q8N815 330 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 ICA1LQ8NDH6 482 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 ADCY4Q8NFM4 1077 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 SPPL2BQ8TCT7 592 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 DDI1Q8WTU0 396 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 RNF139Q8WU17 664 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 RLN3Q8WXF3 142 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 NDRG1Q92597 394 aaKnown RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 GFM2Q969S9 779 aaKnown RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 PGAP3Q96FM1 320 aaPredicted RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 SPACA7Q96KW9 195 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 GCNAQ96QF7 691 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 HAPLN3Q96S86 360 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 KCTD15Q96SI1 283 aaPredicted RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 ILKAPQ9H0C8 392 aaPredicted RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 C12orf65Q9H3J6 166 aaKnown RBP11.14□□□□□ -0.63
SRP54-205ENST00000554803 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 SLC24A3Q9HC58 644 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 CASS4Q9NQ75 786 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 IGSF5Q9NSI5 407 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 CCL26Q9Y258 94 aa11.14□□□□□ -0.63
SRP54-205ENST00000554803 RGSL1A5PLK6 1076 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 ZNF195O14628 629 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 HDAC3O15379 428 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 ATP9BO43861 1147 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 SKAP2O75563 359 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 GJB3O75712 270 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 HAPLN1P10915 354 aaPredicted RBP11.13□□□□□ -0.63
SRP54-205ENST00000554803 COX4I1P13073 169 aa11.13□□□□□ -0.63
SRP54-205ENST00000554803 GLDCP23378 1020 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms