RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZNF585BQ52M93 769 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 DCAF6Q58WW2 860 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 C6orf141Q5SZD1 244 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 GPR139Q6DWJ6 353 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 JADE1Q6IE81 842 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 ZNF280DQ6N043 979 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 SLC30A6Q6NXT4 461 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 B3GNT6Q6ZMB0 384 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 CFAP77Q6ZQR2 320 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 SEPT14Q6ZU15 432 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 DENND5BQ6ZUT9 1274 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-213ENST00000554776 WDR63Q8IWG1 891 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 BEST2Q8NFU1 509 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 NEUROG1Q92886 237 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 RRNAD1Q96FB5 475 aaKnown RBP3.15□□□□□ -1.91
SCFD1-213ENST00000554776 PGAM5Q96HS1 289 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 SLC41A2Q96JW4 573 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 PAFAH2Q99487 392 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 MEIS3Q99687 375 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 FAM110AQ9BQ89 295 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 APOL6Q9BWW8 343 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 TXLNGYQ9BZA5 131 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 KCNN2Q9H2S1 579 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 PIGMQ9H3S5 423 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 ESRP2Q9H6T0 727 aaKnown RBP3.15□□□□□ -1.91
SCFD1-213ENST00000554776 MKKSQ9NPJ1 570 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-213ENST00000554776 CD93Q9NPY3 652 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 PAG1Q9NWQ8 432 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 SLC9A2Q9UBY0 812 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 ERVK-11Q9UQG0 969 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 MAU2Q9Y6X3 613 aa3.15□□□□□ -1.91
SCFD1-213ENST00000554776 OR2A25A4D2G3 310 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ATP2A1O14983 1001 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ADAMDEC1O15204 470 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ASAP2O43150 1006 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 FTCDO95954 541 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 GLUD1P00367 558 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 SRPRAP08240 638 aaKnown RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ACAA1P09110 424 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 NR2F1P10589 423 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 TMEM11P17152 192 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 IL11P20809 199 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 PON1P27169 355 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 GLUD2P49448 558 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 MXI1P50539 228 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 PPP5CP53041 499 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 KRTAP10-9P60411 292 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 UBXN2AP68543 259 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 DSC1Q08554 894 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ACSM2AQ08AH3 577 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 TRAF3Q13114 568 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 RASA2Q15283 850 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 TDRD12Q587J7 1177 aaKnown RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ACSM2BQ68CK6 577 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 PMS2CLQ68D20 193 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ZNF324BQ6AW86 544 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 NAA16Q6N069 864 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 RPUSD3Q6P087 351 aaKnown RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 MTSS1LQ765P7 747 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 LINGO2Q7L985 606 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 SDCCAG8Q86SQ7 713 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 RBM23Q86U06 439 aaKnown RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 SPATA6LQ8N4H0 392 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 AADATQ8N5Z0 425 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 APPL2Q8NEU8 664 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 OR8K5Q8NH50 307 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 HMGCLL1Q8TB92 370 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 WASF1Q92558 559 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 RND1Q92730 232 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 MED30Q96HR3 178 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 RADILQ96JH8 1075 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 SLITRK1Q96PX8 696 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 GCNAQ96QF7 691 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 CTAGE1Q96RT6 745 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ACOX2Q99424 681 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 PCGF1Q9BSM1 259 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 AP1M1Q9BXS5 423 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 SEZ6LQ9BYH1 1024 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 HRH4Q9H3N8 390 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 LTB4R2Q9NPC1 389 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 HINT3Q9NQE9 182 aaKnown RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 AGO1Q9UL18 857 aaKnown RBP3.14□□□□□ -1.91
SCFD1-213ENST00000554776 PADI1Q9ULC6 663 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 CMAHPQ9Y471 501 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 CLIC4Q9Y696 253 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 STON1Q9Y6Q2 735 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 FAM169AQ9Y6X4 670 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 ARHGEF40Q8TER5 1519 aa3.14□□□□□ -1.91
SCFD1-213ENST00000554776 WNT9BO14905 357 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 SCAMP1O15126 338 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 DIAPH2O60879 1101 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 JRKO75564 520 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 MMP9P14780 707 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 ITGB8P26012 769 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 CHATP28329 748 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 TAS2R40P59535 323 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 PPP2R2BQ00005 443 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 BNC1Q01954 994 aa3.13□□□□□ -1.91
SCFD1-213ENST00000554776 CALD1Q05682 793 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms