RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ERVPABLB-1P60509 514 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 RPS14P62263 151 aaKnown RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 RAB1AP62820 205 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ST3GAL1Q11201 340 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SEMA5AQ13591 1074 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 RAB39AQ14964 217 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SHBQ15464 509 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 GEN1Q17RS7 908 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 L1TD1Q5T7N2 865 aaKnown RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 LAYNQ6UX15 382 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SERPINA13PQ6UXR4 307 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 PAQR9Q6ZVX9 377 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 TRAPPC11Q7Z392 1133 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ANKS1BQ7Z6G8 1248 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SYCP3Q8IZU3 236 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 GPD1LQ8N335 351 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SH2D3CQ8N5H7 860 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SLC16A11Q8NCK7 471 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 B3GALNT2Q8NCR0 500 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 OR5B17Q8NGF7 314 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 RASSF8Q8NHQ8 419 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 NOC3LQ8WTT2 800 aaKnown RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 KCNE4Q8WWG9 221 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 CASKIN2Q8WXE0 1202 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 LARP4BQ92615 738 aaKnown RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 GOLGA1Q92805 767 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 PMM1Q92871 262 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 NAF1Q96HR8 494 aaKnown RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 PIWIL1Q96J94 861 aaKnown RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 MED10Q9BTT4 135 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SLC2A11Q9BYW1 496 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 CIPCQ9C0C6 399 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SCAND2PQ9GZW5 306 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF700Q9H0M5 742 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 DPEP3Q9H4B8 488 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 ERVMER34-1Q9H9K5 563 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 CPNE5Q9HCH3 593 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 DMAP1Q9NPF5 467 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 GDF3Q9NR23 364 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 LMBRD1Q9NUN5 540 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SEL1LQ9UBV2 794 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 SUN2Q9UH99 717 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 PLA2G4CQ9UP65 541 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 NCKAP1Q9Y2A7 1128 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 NME7Q9Y5B8 376 aa5.04□□□□□ -1.6
ATXN3-228ENST00000554592 HEMK1Q9Y5R4 338 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-228ENST00000554592 A0A1W2PRX2 142 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 H3BUI4 141 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TLR4O00206 839 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 PMM2O15305 246 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 GCNT3O95395 438 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 KLKB1P03952 638 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 DNTTP04053 509 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 IGHV4-34P06331 123 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 RARGP13631 454 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 ACP1P24666 158 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 CD38P28907 300 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 EPHA8P29322 1005 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 ATICP31939 592 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 PGFP49763 221 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 GZMKP49863 264 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 CTXN1P60606 82 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TNNC1P63316 161 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 COG7P83436 770 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 DGCR2P98153 550 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 APBA1Q02410 837 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 SP140Q13342 867 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 MRPL49Q13405 166 aaKnown RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TRPC3Q13507 836 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 ALCAMQ13740 583 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 CNN3Q15417 329 aaKnown RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TTC31Q49AM3 519 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 RNF220Q5VTB9 566 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 KIAA0895LQ68EN5 471 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 IGFL4Q6B9Z1 124 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 DARS2Q6PI48 645 aaKnown RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TADA2BQ86TJ2 420 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 SFR1Q86XK3 245 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 CACUL1Q86Y37 369 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 WDR49Q8IV35 697 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 D2HGDHQ8N465 521 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF276Q8N554 614 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 SLC35A4Q96G79 324 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 SMARCD1Q96GM5 515 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TNIP3Q96KP6 325 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 CBWD1Q9BRT8 395 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TMEM245Q9H330 911 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF703Q9H7S9 590 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 CSNK1G1Q9HCP0 422 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 SCML1Q9UN30 329 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 SCML2Q9UQR0 700 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 RUVBL1Q9Y265 456 aaKnown RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 PCDHGB6Q9Y5F9 930 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 TRIP11Q15643 1979 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms