RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 GALNT17Q6IS24 598 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KCTD13Q8WZ19 329 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RERGQ96A58 199 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SLC7A6OSQ96CW6 309 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ULBP1Q9BZM6 244 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 DNAJC28Q9NX36 388 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 DCDC2Q9UHG0 476 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM98Q9Y2Y6 226 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZFYVE16Q7Z3T8 1539 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 H3BNC9 293 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GJA4P35212 333 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LEPRP48357 1165 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ARSFP54793 590 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CAV1Q03135 178 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SREBF2Q12772 1141 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SURF1Q15526 300 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NNATQ16517 81 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GPATCH4Q5T3I0 446 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TRPM8Q7Z2W7 1104 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GTF2H4Q92759 462 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MYLPFQ96A32 169 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LMAN2LQ9H0V9 348 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NLE1Q9NVX2 485 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TFECO14948 347 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SASH3O75995 380 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CHN1P15882 459 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FSCN1Q16658 493 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL38Q2WGJ6 581 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 STRA8Q7Z7C7 330 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF454Q8N9F8 522 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SUN3Q8TAQ9 357 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TFB1MQ8WVM0 346 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 XAGE5Q8WWM1 108 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LRRC1Q9BTT6 524 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FNDC11Q9BVV2 318 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 B3GALT1Q9Y5Z6 326 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KDM5DQ9BY66 1539 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LATO43561 262 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SLC14A2Q15849 920 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CACHD1Q5VU97 1274 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NOXRED1Q6NXP6 359 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 WASH2PQ6VEQ5 465 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ADSSL1Q8N142 457 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PHTF2Q8N3S3 785 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF527Q8NB42 609 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SLITRK2Q9H156 845 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FARSBQ9NSD9 589 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C13orf42A0A1B0GVH6 325 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TTC26A0AVF1 554 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 AURKAO14965 403 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PLIN3O60664 434 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C9P02748 559 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FDX1P10109 184 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 IFI30P13284 250 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GRIA3P42263 894 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GPD2P43304 727 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GPC5P78333 572 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MEF2AQ02078 507 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 DSG1Q02413 1049 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 DDR1Q08345 913 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ARMCX4Q5H9R4 360 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGAP22Q7Z5H3 698 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LRRC6Q86X45 466 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 METTL21AQ8WXB1 218 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 OR51V1Q9H2C8 321 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MMADHCQ9H3L0 296 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FANCEQ9HB96 536 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MRM3Q9HC36 420 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C11orf16Q9NQ32 467 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZCWPW2Q504Y3 356 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C18orf8Q96DM3 657 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC17Q96LX7 622 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CDH19Q9H159 772 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PORCNQ9H237 461 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 BCORL1Q5H9F3 1711 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PQ27 194 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PQ64 194 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PQD8 194 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MCM3APO60318 1980 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NPHS1O60500 1241 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 REM1O75628 298 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 LCKP06239 509 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CPOXP36551 454 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SSR2P43308 183 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 BDKRB1P46663 353 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SOX9P48436 509 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RNF4P78317 190 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CBLBQ13191 982 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ITGB3BPQ13352 177 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MAD2L1BPQ15013 274 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ADGRA1Q86SQ6 560 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RNF17Q9BXT8 1623 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TUBB1Q9H4B7 451 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GKN1Q9NS71 199 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 EFCAB5A4FU69 1503 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 UMODL1Q5DID0 1318 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CRTAMO95727 393 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 JAK3P52333 1124 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RGS8P57771 180 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KCNJ2P63252 427 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms