RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ZFYVE27Q5T4F4 411 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 MARK2Q7KZI7 788 aaKnown RBP18.66■□□□□ 0.58
CPSF2-203ENST00000554290 GALNT13Q8IUC8 556 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 CCNYQ8ND76 341 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 PATE1Q8WXA2 126 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 SGF29Q96ES7 293 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 DPYSL5Q9BPU6 564 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 NUDT22Q9BRQ3 303 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 RIOK2Q9BVS4 552 aaKnown RBP18.66■□□□□ 0.58
CPSF2-203ENST00000554290 PCDH9Q9HC56 1237 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 ST14Q9Y5Y6 855 aa18.66■□□□□ 0.58
CPSF2-203ENST00000554290 CFAP46Q8IYW2 2715 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 IGHV5-10-1A0A0J9YXX1 117 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 C9orf172C9J069 976 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 MAP3K6O95382 1288 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 ASMTLO95671 621 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 PRLP01236 227 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 LIMK2P53671 638 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 SQSTM1Q13501 440 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 ZNF574Q6ZN55 896 aaPredicted RBP18.65■□□□□ 0.58
CPSF2-203ENST00000554290 TRIM74Q86UV6 250 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 ZFAND4Q86XD8 727 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 ZSCAN1Q8NBB4 408 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 LPCAT1Q8NF37 534 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 ARRDC2Q8TBH0 407 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 ZNF830Q96NB3 372 aaPredicted RBP18.65■□□□□ 0.58
CPSF2-203ENST00000554290 SMIM14Q96QK8 99 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 SEMA4CQ9C0C4 833 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 KCNK4Q9NYG8 393 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 FOXJ2Q9P0K8 574 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 PLEKHM1Q9Y4G2 1056 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 UNC13CQ8NB66 2214 aa18.65■□□□□ 0.58
CPSF2-203ENST00000554290 HELZ2Q9BYK8 2649 aaKnown RBP18.64■□□□□ 0.57
CPSF2-203ENST00000554290 IGHV1OR21-1A0A087WYE8 117 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 B8ZZF3 427 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 J3QKU1 62 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 PPM1DO15297 605 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 INPP4BO15327 924 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 CLDN7O95471 211 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 HNRNPH3P31942 346 aaKnown RBP18.64■□□□□ 0.57
CPSF2-203ENST00000554290 TAS2R40P59535 323 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 IHHQ14623 411 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 SLC18A3Q16572 532 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 XKR5Q6UX68 686 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 CCDC13Q8IYE1 715 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 RCBTB1Q8NDN9 531 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 CCDC112Q8NEF3 446 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 OR4D9Q8NGE8 314 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 FAF2Q96CS3 445 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 HDAC11Q96DB2 347 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 COX14Q96I36 57 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 CCDC74BQ96LY2 380 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 TAAR9Q96RI9 348 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 LYSMD1Q96S90 227 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 AGAP2Q99490 1192 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 VPS18Q9P253 973 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 ZNHIT2Q9UHR6 403 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 NENFQ9UMX5 172 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 ATMQ13315 3056 aa18.64■□□□□ 0.57
CPSF2-203ENST00000554290 C1orf232A0A0U1RR37 186 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.63■□□□□ 0.57
CPSF2-203ENST00000554290 ITGB2P05107 769 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 HLA-DQB2P05538 268 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 CCL4P13236 92 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 CSTF2P33240 577 aaKnown RBP eCLIP18.63■□□□□ 0.57
CPSF2-203ENST00000554290 MAN1A1P33908 653 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 GPLD1P80108 840 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 GBE1Q04446 702 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 NIPAL4Q0D2K0 466 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 DTX1Q86Y01 620 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 CPNE8Q86YQ8 564 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 PQLC3Q8N755 202 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 AGBL5Q8NDL9 886 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 CCHCR1Q8TD31 782 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 AHCYL2Q96HN2 611 aaKnown RBP18.63■□□□□ 0.57
CPSF2-203ENST00000554290 ARHGAP9Q9BRR9 750 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 MLPHQ9BV36 600 aaPredicted RBP18.63■□□□□ 0.57
CPSF2-203ENST00000554290 ADGRE3Q9BY15 652 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 DEF6Q9H4E7 631 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 FAM83DQ9H4H8 585 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 DTLQ9NZJ0 730 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 PKD2L2Q9NZM6 624 aa18.63■□□□□ 0.57
CPSF2-203ENST00000554290 RGSL1A5PLK6 1076 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 STMND1H3BQB6 276 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 JCHAINP01591 159 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 KDELR1P24390 212 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 FASLGP48023 281 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 SPINT3P49223 89 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 PPM1FP49593 454 aaPredicted RBP18.62■□□□□ 0.57
CPSF2-203ENST00000554290 SLC10A2Q12908 348 aaPredicted RBP18.62■□□□□ 0.57
CPSF2-203ENST00000554290 NKAIN2Q5VXU1 208 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 SFRP1Q8N474 314 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 RNF157Q96PX1 679 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 SLC38A3Q99624 504 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 ZMYND15Q9H091 742 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 STN1Q9H668 368 aaKnown RBP18.62■□□□□ 0.57
CPSF2-203ENST00000554290 RMI1Q9H9A7 625 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 PCDHGA3Q9Y5H0 932 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 ZNF462Q96JM2 2506 aa18.62■□□□□ 0.57
CPSF2-203ENST00000554290 ARHGEF17Q96PE2 2063 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms