RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 DPM1O60762 260 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
NEK9-204ENST00000554258 SLC2A3P11169 496 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 PTPN9P43378 593 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 PPM1FP49593 454 aaPredicted RBP16.86■□□□□ 0.29
NEK9-204ENST00000554258 VAV2P52735 878 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 HADHBP55084 474 aaKnown RBP16.86■□□□□ 0.29
NEK9-204ENST00000554258 CDH4P55283 916 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 INPP5AQ14642 412 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 ZRSR2Q15696 482 aaKnown RBP16.86■□□□□ 0.29
NEK9-204ENST00000554258 ZNF662Q6ZS27 426 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 CCL4L1Q8NHW4 92 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 RXFP2Q8WXD0 754 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
NEK9-204ENST00000554258 MLXIPLQ9NP71 852 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 FBXO8Q9NRD0 319 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 MYO1AQ9UBC5 1043 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 HECAQ9UBI9 543 aaPredicted RBP16.86■□□□□ 0.29
NEK9-204ENST00000554258 ZNF451Q9Y4E5 1061 aa16.86■□□□□ 0.29
NEK9-204ENST00000554258 IGHV1OR21-1A0A087WYE8 117 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 A8MU76 341 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 CREG1O75629 220 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 TIMP2P16035 220 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 GKP32189 559 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 GGCXP38435 758 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 SERPINH1P50454 418 aaKnown RBP16.85■□□□□ 0.29
NEK9-204ENST00000554258 ZNF143P52747 638 aaPredicted RBP16.85■□□□□ 0.29
NEK9-204ENST00000554258 PITX1P78337 314 aaPredicted RBP16.85■□□□□ 0.29
NEK9-204ENST00000554258 OGDHQ02218 1023 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 SQSTM1Q13501 440 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 WSCD2Q2TBF2 565 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 SLC25A52Q3SY17 297 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 CCDC14Q49A88 953 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 SNAP47Q5SQN1 464 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 OTUD1Q5VV17 481 aaPredicted RBP16.85■□□□□ 0.29
NEK9-204ENST00000554258 PAPD7Q5XG87 772 aaKnown RBP16.85■□□□□ 0.29
NEK9-204ENST00000554258 SLC6A19Q695T7 634 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 RETSATQ6NUM9 610 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 TMEM71Q6P5X7 295 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 TTC7BQ86TV6 843 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 RHOT2Q8IXI1 618 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 EMC1Q8N766 993 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 OR6K2Q8NGY2 324 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 ZDHHC1Q8WTX9 485 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 PNPLA2Q96AD5 504 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 SNRNP40Q96DI7 357 aaKnown RBP16.85■□□□□ 0.29
NEK9-204ENST00000554258 DESI2Q9BSY9 194 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 NUP85Q9BW27 656 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 TM6SF2Q9BZW4 377 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 LACRTQ9GZZ8 138 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 FAM204AQ9H8W3 233 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 FGF22Q9HCT0 170 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 ASF1BQ9NVP2 202 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 MDC1Q14676 2089 aaKnown RBP16.85■□□□□ 0.29
NEK9-204ENST00000554258 ZGRF1Q86YA3 2104 aa16.85■□□□□ 0.29
NEK9-204ENST00000554258 SYNJ2BP-COX16A0A087WUM0 186 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 A0A0D9SEW6 157 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 POLR1CO15160 346 aaPredicted RBP16.84■□□□□ 0.29
NEK9-204ENST00000554258 ECEL1O95672 775 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 GPD1P21695 349 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 NFKBIAP25963 317 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 ITGA3P26006 1051 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 CCR1P32246 355 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 PTGER4P35408 488 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 CCL11P51671 97 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 CHAF1BQ13112 559 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 CPZQ66K79 652 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 DCUN1D2Q6PH85 259 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 C17orf82Q86X59 251 aaPredicted RBP16.84■□□□□ 0.29
NEK9-204ENST00000554258 OR56A4Q8NGH8 313 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 SLC35G2Q8TBE7 412 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 MCEEQ96PE7 176 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 RANBP9Q96S59 729 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 CNPY3Q9BT09 278 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 ULBP3Q9BZM4 244 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 TRIM7Q9C029 511 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 LATS2Q9NRM7 1088 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 SPATS2LQ9NUQ6 558 aaKnown RBP16.84■□□□□ 0.29
NEK9-204ENST00000554258 COX16Q9P0S2 106 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 STAP1Q9ULZ2 295 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 COQ6Q9Y2Z9 468 aa16.84■□□□□ 0.29
NEK9-204ENST00000554258 FCF1Q9Y324 198 aaKnown RBP16.84■□□□□ 0.29
NEK9-204ENST00000554258 TMEM202A6NGA9 273 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 LRRTM2O43300 516 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 UGT2B4P06133 528 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 TFE3P19532 575 aaPredicted RBP16.83■□□□□ 0.28
NEK9-204ENST00000554258 CDK18Q07002 472 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 CHRNA6Q15825 494 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 C6orf15Q6UXA7 325 aaPredicted RBP16.83■□□□□ 0.28
NEK9-204ENST00000554258 STRADAQ7RTN6 431 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 LYSMD3Q7Z3D4 306 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 RNF31Q96EP0 1072 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 CALR3Q96L12 384 aaKnown RBP16.83■□□□□ 0.28
NEK9-204ENST00000554258 CFAP57Q96MR6 1250 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 SPON2Q9BUD6 331 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 ACSS2Q9NR19 701 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 CTTNBP2NLQ9P2B4 639 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 LCMT1Q9UIC8 334 aa16.83■□□□□ 0.28
NEK9-204ENST00000554258 TFR2Q9UP52 801 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms