RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ADAMTSL4Q6UY14 1074 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 KCNMB4Q86W47 210 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 TRAM1L1Q8N609 369 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 DDHD1Q8NEL9 900 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 EPS8L3Q8TE67 593 aaKnown RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 PYROXD1Q8WU10 500 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 HDAC10Q969S8 669 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CFAP36Q96G28 342 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 C1QTNF1Q9BXJ1 281 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 SGK2Q9HBY8 427 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 BPIFA1Q9NP55 256 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 SLC8A2Q9UPR5 921 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 PLAAQ9Y263 795 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 ST14Q9Y5Y6 855 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 PRSS21Q9Y6M0 314 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 KPNA3O00505 521 aaPredicted RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 MMP20O60882 483 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 ATG13O75143 517 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 ACSL3O95573 720 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 APBB3O95704 486 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 POLBP06746 335 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 RPS3P23396 243 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CCNFP41002 786 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 PDE1BQ01064 536 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CHRNA6Q15825 494 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 ATP13A5Q4VNC0 1218 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 TTMPQ5BVD1 217 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 DENND2CQ68D51 928 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 TMEM207Q6UWW9 146 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 TIFABQ6ZNK6 161 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CEP128Q6ZU80 1094 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 Q6ZVL8 140 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 C11orf96Q7Z7L8 435 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CLEC14AQ86T13 490 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 ZC3HC1Q86WB0 502 aaKnown RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 TMEM151AQ8N4L1 468 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 DNAAF3Q8N9W5 541 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 SIPA1Q96FS4 1042 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 BMFQ96LC9 184 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 RBBP8Q99708 897 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 COL25A1Q9BXS0 654 aaPredicted RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 C6orf106Q9H6K1 298 aaPredicted RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 FBXL12Q9NXK8 326 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 FBXL21Q9UKT6 434 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 A0A087WUV0 522 aaPredicted RBP6.71□□□□□ -1.33
LINC00517-202ENST00000554257 A0A1W2PR77 199 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 IGLON5A6NGN9 336 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 FOXO6A8MYZ6 492 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 SYNCRIPO60506 623 aaKnown RBP6.71□□□□□ -1.33
LINC00517-202ENST00000554257 RFPL1O75677 317 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 BCKDHBP21953 392 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 SPAM1P38567 509 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 RECQLP46063 649 aaPredicted RBP6.71□□□□□ -1.33
LINC00517-202ENST00000554257 PFN3P60673 137 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 IRF4Q15306 451 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 DBN1Q16643 649 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 AFTPHQ6ULP2 937 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 KBTBD6Q86V97 674 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 ZNF547Q8IVP9 402 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 SLC22A18ASQ8N1D0 253 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 RYBPQ8N488 228 aaPredicted RBP6.71□□□□□ -1.33
LINC00517-202ENST00000554257 FAM160A2Q8N612 972 aaPredicted RBP6.71□□□□□ -1.33
LINC00517-202ENST00000554257 GIMAP7Q8NHV1 300 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 LKAAEAR1Q8TD35 194 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 RMDN1Q96DB5 314 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 WRAP53Q9BUR4 548 aaKnown RBP6.71□□□□□ -1.33
LINC00517-202ENST00000554257 LGR4Q9BXB1 951 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 GALPQ9UBC7 116 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 WDR87Q6ZQQ6 2873 aa6.71□□□□□ -1.33
LINC00517-202ENST00000554257 A8MX80 341 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 CHUKO15111 745 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 BNIP3LO60238 219 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 RNGTTO60942 597 aaKnown RBP6.71□□□□□ -1.34
LINC00517-202ENST00000554257 DNAJC6O75061 913 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 RECQL5O94762 991 aaPredicted RBP6.71□□□□□ -1.34
LINC00517-202ENST00000554257 SLC34A2O95436 690 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 ALDOAP04075 364 aaKnown RBP6.71□□□□□ -1.34
LINC00517-202ENST00000554257 MC4RP32245 332 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 STX2P32856 288 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 MGAT5Q09328 741 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 LAMB3Q13751 1172 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 SNX20Q7Z614 316 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 ABI3BPQ7Z7G0 1075 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 TTC7BQ86TV6 843 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 HORMAD1Q86X24 394 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 OR2T34Q8NGX1 318 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 OR4L1Q8NH43 312 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 PDCD6IPQ8WUM4 868 aaKnown RBP6.71□□□□□ -1.34
LINC00517-202ENST00000554257 SCAMP4Q969E2 229 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 GPR22Q99680 433 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 OLFM1Q99784 485 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 BOCQ9BWV1 1114 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 PCED1AQ9H1Q7 454 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 TMBIM4Q9HC24 238 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 SLC24A2Q9UI40 661 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 CDYLQ9Y232 598 aa6.71□□□□□ -1.34
LINC00517-202ENST00000554257 ABCA7Q8IZY2 2146 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms