RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RFX2P48378 723 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 GZMKP49863 264 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZNF267Q14586 743 aaPredicted RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 MEP1AQ16819 746 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 AOC3Q16853 763 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 CES5AQ6NT32 575 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TMEM81Q6P7N7 255 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 BRAT1Q6PJG6 821 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 CORO6Q6QEF8 472 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 USP17L6PQ6QN14 398 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZNF534Q76KX8 674 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 BEND5Q7L4P6 421 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 HDDC2Q7Z4H3 204 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 NRARPQ7Z6K4 114 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ERO1BQ86YB8 467 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 PLD3Q8IV08 490 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 MAPKAPK5Q8IW41 473 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TNS4Q8IZW8 715 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 RPL3LQ92901 407 aaKnown RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 LGALS12Q96DT0 336 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 TSNARE1Q96NA8 513 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 EBNA1BP2Q99848 306 aaKnown RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 CBWD1Q9BRT8 395 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 LXNQ9BS40 222 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 SLC6A17Q9H1V8 727 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZC4H2Q9NQZ6 224 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 FAM8A1Q9UBU6 413 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 VTI1BQ9UEU0 232 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 SRRDQ9UH36 339 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 NUFIP1Q9UHK0 495 aaKnown RBP9.53□□□□□ -0.88
SIX4-202ENST00000554079 ZDHHC2Q9UIJ5 367 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 STOML2Q9UJZ1 356 aa9.53□□□□□ -0.88
SIX4-202ENST00000554079 KPNA7A9QM74 516 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 NME4O00746 187 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 SDHDO14521 159 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 SOAT2O75908 522 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 C2P06681 752 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 GPIP06744 558 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 KRT19P08727 400 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 THRBP10828 461 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 PCSK2P16519 638 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 CD6P30203 668 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 LRPAP1P30533 357 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 HTR7P34969 479 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 TGFBR2P37173 567 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 ETV6P41212 452 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 ERVK-21P61565 698 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 OLR1P78380 273 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 FADDQ13158 208 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 NFIXQ14938 502 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 BTBD16Q32M84 506 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 SYT6Q5T7P8 510 aaPredicted RBP9.52□□□□□ -0.89
SIX4-202ENST00000554079 STEAP4Q687X5 459 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 LAMTOR1Q6IAA8 161 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 TAF2Q6P1X5 1199 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 DARS2Q6PI48 645 aaKnown RBP9.52□□□□□ -0.89
SIX4-202ENST00000554079 MOXD1Q6UVY6 613 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 CDH24Q86UP0 819 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 PM20D2Q8IYS1 436 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 MICU2Q8IYU8 434 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 ADGRF4Q8IZF3 695 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 PLD6Q8N2A8 252 aaKnown RBP9.52□□□□□ -0.89
SIX4-202ENST00000554079 MCUQ8NE86 351 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 NSUN6Q8TEA1 469 aaKnown RBP9.52□□□□□ -0.89
SIX4-202ENST00000554079 POMGNT1Q8WZA1 660 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 NCLNQ969V3 563 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 ZHX1-C8orf76Q96EF9 292 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 MOCOSQ96EN8 888 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 MSANTD3Q96H12 275 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 OR2A14Q96R47 310 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 HDHD5Q9BXW7 423 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 PPA2Q9H2U2 334 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 NIPAL2Q9H841 368 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 RSAD1Q9HA92 442 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 TMEM39AQ9NV64 488 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 EHD3Q9NZN3 535 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 ABCD2Q9UBJ2 740 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 VAV3Q9UKW4 847 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 INTS6Q9UL03 887 aaKnown RBP9.52□□□□□ -0.89
SIX4-202ENST00000554079 SCML1Q9UN30 329 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 AGTPBP1Q9UPW5 1226 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 BTBD3Q9Y2F9 522 aa9.52□□□□□ -0.89
SIX4-202ENST00000554079 TCRBV5S2A0A599 114 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 APOC4-APOC2K7ER74 178 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SH3BP5O60239 455 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PIGNO95427 931 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 APOC2P02655 101 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 FAM86B2P0C5J1 330 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 ADORA3P0DMS8 318 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 TFEBP19484 476 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 GYG1P46976 350 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 CLK1P49759 484 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 ROR1Q01973 937 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 SLC25A11Q02978 314 aaKnown RBP9.51□□□□□ -0.89
SIX4-202ENST00000554079 CD47Q08722 323 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 DAG1Q14118 895 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 UGP2Q16851 508 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 AAK1Q2M2I8 961 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 PIK3R6Q5UE93 754 aa9.51□□□□□ -0.89
SIX4-202ENST00000554079 CYS1Q717R9 158 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms