RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 COPG2Q9UBF2 871 aa3.64□□□□□ -1.83
EFCAB11-204ENST00000553871 STK39Q9UEW8 545 aa3.64□□□□□ -1.83
EFCAB11-204ENST00000553871 SNX9Q9Y5X1 595 aa3.64□□□□□ -1.83
EFCAB11-204ENST00000553871 CLIC4Q9Y696 253 aa3.64□□□□□ -1.83
EFCAB11-204ENST00000553871 COL3A1P02461 1466 aaPredicted RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 EIF4E1BA6NMX2 242 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 M0QZ24 198 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 SOCS6O14544 535 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 MAP2K7O14733 419 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 TCERG1O14776 1098 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 NDUFS7O75251 213 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 MATR3P43243 847 aaKnown RBP eCLIP3.63□□□□□ -1.832e-7■■■□□ 16.8
EFCAB11-204ENST00000553871 PEX5P50542 639 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 GPR143P51810 404 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 CRYZQ08257 329 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 DDR1Q08345 913 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 GRSF1Q12849 480 aaKnown RBP eCLIP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 GRIK2Q13002 908 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 KCNC3Q14003 757 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 ATP13A5Q4VNC0 1218 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 SOWAHCQ53LP3 525 aaPredicted RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 DCST1Q5T197 706 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 GPR139Q6DWJ6 353 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 RGMBQ6NW40 437 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 DUS1LQ6P1R4 473 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 C8orf82Q6P1X6 216 aaPredicted RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 C16orf54Q6UWD8 224 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 CFAP77Q6ZQR2 320 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 CCDC190Q86UF4 302 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 OR8H2Q8N162 312 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 NME8Q8N427 588 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 MCUQ8NE86 351 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 APPL2Q8NEU8 664 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 FAM216AQ8WUB2 273 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 RND1Q92730 232 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 PPP1R13BQ96KQ4 1090 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 NTPCRQ9BSD7 190 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 CENPOQ9BU64 300 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 SEZ6LQ9BYH1 1024 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 NOX4Q9NPH5 578 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 ANKEF1Q9NU02 776 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 ARHGEF38Q9NXL2 777 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 CLIC5Q9NZA1 410 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 UBA2Q9UBT2 640 aaPredicted RBP3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 LOXL2Q9Y4K0 774 aa3.63□□□□□ -1.83
EFCAB11-204ENST00000553871 SPINT2O43291 252 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 PLRG1O43660 514 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 MITFO75030 526 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 GLUD1P00367 558 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 ICAM1P05362 532 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 HOXA11P31270 313 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 ARRB2P32121 409 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 MSH2P43246 934 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 GLUD2P49448 558 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 COMPP49747 757 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 CLCNKAP51800 687 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 STAT2P52630 851 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 HNRNPH2P55795 449 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 RRP1P56182 461 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 Q0VFX4 171 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 SREBF2Q12772 1141 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 CALCRLQ16602 461 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 XKR9Q5GH70 373 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 KCNT1Q5JUK3 1230 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 FRG2Q64ET8 278 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 PMS2CLQ68D20 193 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 CCNI2Q6ZMN8 369 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 CLEC17AQ6ZS10 378 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 GPR180Q86V85 440 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 SCYL3Q8IZE3 742 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 SNRNP27Q8WVK2 155 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 APBB2Q92870 758 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 SLF1Q9BQI6 1058 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 OSGEPL1Q9H4B0 414 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 DNAJC18Q9H819 358 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 SEBOXQ9HB31 216 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 EPB41L5Q9HCM4 733 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 PDE7BQ9NP56 450 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 MMP25Q9NPA2 562 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 LTB4R2Q9NPC1 389 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 GIMAP4Q9NUV9 329 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 NKIRAS2Q9NYR9 191 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 SEC63Q9UGP8 760 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 POLG2Q9UHN1 485 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 PCDHA7Q9UN72 937 aa3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 PPIEQ9UNP9 301 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 PTRH2Q9Y3E5 179 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-204ENST00000553871 LOC100509620A0A075B734 347 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 A0A0U1RQJ8 604 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 CPED1A4D0V7 1026 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 GOLGA6L9A6NEM1 432 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 SMAD9O15198 467 aaKnown RBP3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 P4HA2O15460 535 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 ENTPD3O75355 529 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 GAGE7O76087 117 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 KCNK5O95279 499 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 GAGE12FP0CL80 117 aa3.61□□□□□ -1.83
EFCAB11-204ENST00000553871 GAGE12GP0CL81 117 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms