RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CCZ1BP86790 482 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 CCZ1P86791 482 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 PPARDQ03181 441 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 MPP3Q13368 585 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 FGL2Q14314 439 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 INPP5AQ14642 412 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 CNGA3Q16281 694 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 WSCD2Q2TBF2 565 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 RAET1GQ6H3X3 334 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 ENPP7Q6UWV6 458 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 MACC1Q6ZN28 852 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 ARHGEF18Q6ZSZ5 1173 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 B4GALNT4Q76KP1 1039 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 GATAD2AQ86YP4 633 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 RAVER1Q8IY67 606 aaKnown RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 NRSN1Q8IZ57 195 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 CNTD1Q8N815 330 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 TP53I13Q8NBR0 393 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 PIH1D2Q8WWB5 315 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 ALG3Q92685 438 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 CENPTQ96BT3 561 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 WDR92Q96MX6 357 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 FCRL5Q96RD9 977 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 MCCC1Q96RQ3 725 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 KLF6Q99612 283 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 APOOQ9BUR5 198 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 DUSP23Q9BVJ7 150 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 GPR63Q9BZJ6 419 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 CARD9Q9H257 536 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 KLQ9UEF7 1012 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 PCOLCE2Q9UKZ9 415 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 AAR2Q9Y312 384 aaKnown RBP8.33□□□□□ -1.08
PSEN1-209ENST00000553855 PPIL1Q9Y3C6 166 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 ZFHX4Q86UP3 3567 aa8.33□□□□□ -1.08
PSEN1-209ENST00000553855 TNRC6BQ9UPQ9 1833 aaKnown RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 BAHCC1Q9P281 2608 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 A0A0U1RQJ8 604 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 RGSL1A5PLK6 1076 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 NPIPB15A6NHN6 443 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ANKRD66B4E2M5 251 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 DDX3YO15523 660 aaKnown RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 TNFSF14O43557 240 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 SDC3O75056 442 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 NDST3O95803 873 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 GAS8O95995 478 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 CSF2P04141 144 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ANXA6P08133 673 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ALPIP09923 528 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 CDK4P11802 303 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 HLA-DPA1P20036 260 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 STIP1P31948 543 aaKnown RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ETV3P41162 512 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 LMAN1P49257 510 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ADCY2Q08462 1091 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 WASHC5Q12768 1159 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 RALGDSQ12967 914 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 BNIP3Q12983 259 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 PEX6Q13608 980 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 GALNT3Q14435 633 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 NFATC4Q14934 902 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ELOCQ15369 112 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF542PQ5EBM4 170 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 LRRC66Q68CR7 880 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ESRP1Q6NXG1 681 aaKnown RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 PNCKQ6P2M8 343 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 CRTC1Q6UUV9 634 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 RD3Q7Z3Z2 195 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 PIP4P1Q86T03 277 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 HID1Q8IV36 788 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 PHACTR4Q8IZ21 702 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF567Q8N184 647 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 FSTL5Q8N475 847 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 EID2Q8N6I1 236 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 SPATA22Q8NHS9 363 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 LMX1AQ8TE12 382 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 SAP25Q8TEE9 199 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 AP2M1Q96CW1 435 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 DTD2Q96FN9 168 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 CNDP2Q96KP4 475 aaKnown RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 COQ10AQ96MF6 247 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 CDH19Q9H159 772 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 TRABDQ9H4I3 376 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ZFYVE1Q9HBF4 777 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 MBNL1Q9NR56 388 aaKnown RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 HOMER3Q9NSC5 361 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 UBP1Q9NZI7 540 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 NCKIPSDQ9NZQ3 722 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 HACD3Q9P035 362 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 APOBEC3BQ9UH17 382 aaKnown RBP8.32□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF148Q9UQR1 794 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 OR1A2Q9Y585 309 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 NUMA1Q14980 2115 aa8.32□□□□□ -1.08
PSEN1-209ENST00000553855 VPS13AQ96RL7 3174 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 SPAARA0A1B0GVQ0 90 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 E7EVH7 732 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 FFAR2O15552 330 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 PSMD3O43242 534 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 AQP9O43315 295 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 CEP104O60308 925 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms