RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 COX14Q96I36 57 aa20.26■□□□□ 0.83
FOXA1-203ENST00000553751 HIC2Q96JB3 615 aa20.26■□□□□ 0.83
FOXA1-203ENST00000553751 SRPK1Q96SB4 655 aaKnown RBP20.26■□□□□ 0.83
FOXA1-203ENST00000553751 GPR63Q9BZJ6 419 aa20.26■□□□□ 0.83
FOXA1-203ENST00000553751 NFKBIL1Q9UBC1 381 aaPredicted RBP20.26■□□□□ 0.83
FOXA1-203ENST00000553751 CNOT6Q9ULM6 557 aaKnown RBP20.26■□□□□ 0.83
FOXA1-203ENST00000553751 SUFUQ9UMX1 484 aa20.26■□□□□ 0.83
FOXA1-203ENST00000553751 DOLKQ9UPQ8 538 aa20.26■□□□□ 0.83
FOXA1-203ENST00000553751 C1QTNF9BB2RNN3 333 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 INPP4BO15327 924 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 ANXA9O76027 345 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 GP1BAP07359 652 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 IVLP07476 585 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 C1QTNF9P0C862 333 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 HLA-DPA1P20036 260 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 POLD2P49005 469 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 GEMP55040 296 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 RPS6KA1Q15418 735 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 NR0B2Q15466 257 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 GUSBP11Q6P575 273 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 UNQ6494/PRO21346Q6UXR6 183 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 TMPRSS12Q86WS5 348 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 MARCH9Q86YJ5 346 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 ARL10Q8N8L6 244 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 KYQ8NBH2 561 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 GPR26Q8NDV2 337 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 CCL4L1Q8NHW4 92 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 SCARF2Q96GP6 870 aaPredicted RBP20.25■□□□□ 0.83
FOXA1-203ENST00000553751 FSD1LQ9BXM9 530 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 CDH19Q9H159 772 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 CARD9Q9H257 536 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 EVA1BQ9NVM1 165 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 TMEM98Q9Y2Y6 226 aa20.25■□□□□ 0.83
FOXA1-203ENST00000553751 EME2A4GXA9 379 aaPredicted RBP20.24■□□□□ 0.83
FOXA1-203ENST00000553751 FAM149AA5PLN7 773 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 C5orf60A6NFR6 353 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 FGF1P05230 155 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 ADRA1AP35348 466 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 TNNT3P45378 269 aaPredicted RBP20.24■□□□□ 0.83
FOXA1-203ENST00000553751 GDF10P55107 478 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 INSM1Q01101 510 aaPredicted RBP20.24■□□□□ 0.83
FOXA1-203ENST00000553751 HES3Q5TGS1 186 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 ALS2CLQ60I27 953 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 SLC13A5Q86YT5 568 aaPredicted RBP20.24■□□□□ 0.83
FOXA1-203ENST00000553751 TTC30BQ8N4P2 665 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 FAM71DQ8N9W8 422 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 TRIM58Q8NG06 486 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 IFI44Q8TCB0 444 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 SCG3Q8WXD2 468 aaKnown RBP20.24■□□□□ 0.83
FOXA1-203ENST00000553751 ATG4AQ8WYN0 398 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 GLMNQ92990 594 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 FICDQ9BVA6 458 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 TRABDQ9H4I3 376 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 SUDS3Q9H7L9 328 aaPredicted RBP20.24■□□□□ 0.83
FOXA1-203ENST00000553751 RAD18Q9NS91 495 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 GPR34Q9UPC5 381 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 USP24Q9UPU5 2620 aa20.24■□□□□ 0.83
FOXA1-203ENST00000553751 AGTP01019 485 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 BPIP17213 487 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 HMGCLP35914 325 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 GNPDA1P46926 289 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 RPIAP49247 311 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 OLIG2Q13516 323 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 TAF8Q7Z7C8 310 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 NRROSQ86YC3 692 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 KLHDC8BQ8IXV7 354 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 WDFY3Q8IZQ1 3526 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 GPBAR1Q8TDU6 330 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 TMEM121Q9BTD3 319 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 ZSCAN5AQ9BUG6 496 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 TLR10Q9BXR5 811 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 TRNAU1APQ9NX07 287 aaKnown RBP20.23■□□□□ 0.83
FOXA1-203ENST00000553751 HACD3Q9P035 362 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 SIRPGQ9P1W8 387 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 VPS18Q9P253 973 aa20.23■□□□□ 0.83
FOXA1-203ENST00000553751 AAR2Q9Y312 384 aaKnown RBP20.23■□□□□ 0.83
FOXA1-203ENST00000553751 OAS3Q9Y6K5 1087 aaKnown RBP20.23■□□□□ 0.83
FOXA1-203ENST00000553751 ASXL3Q9C0F0 2248 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 CPED1A4D0V7 1026 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 ATP1A1P05023 1023 aaKnown RBP20.22■□□□□ 0.83
FOXA1-203ENST00000553751 E2F1Q01094 437 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 PRPSAP1Q14558 356 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 ZNF569Q5MCW4 686 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 RANBP10Q6VN20 620 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 EFL1Q7Z2Z2 1120 aaKnown RBP20.22■□□□□ 0.83
FOXA1-203ENST00000553751 GLT6D1Q7Z4J2 308 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 TRAM1L1Q8N609 369 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 BLOC1S5Q8TDH9 187 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 PPP1R2P1Q96PQ5 205 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 PLEKHG4BQ96PX9 1271 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 SPATA16Q9BXB7 569 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 KCNF1Q9H3M0 494 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 PADI4Q9UM07 663 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 ST14Q9Y5Y6 855 aa20.22■□□□□ 0.83
FOXA1-203ENST00000553751 LIASO43766 372 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 OPA1O60313 960 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 ADCY8P40145 1251 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 ILF3Q12906 894 aaKnown RBP eCLIP20.21■□□□□ 0.83
FOXA1-203ENST00000553751 CAMK2BQ13554 666 aa20.21■□□□□ 0.83
FOXA1-203ENST00000553751 OASLQ15646 514 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms