RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NKAPQ8N5F7 415 aaKnown RBP7.3□□□□□ -1.24
ATXN3-221ENST00000553498 CFAP61Q8NHU2 1237 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 RFWD2Q8NHY2 731 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 MAGEC3Q8TD91 643 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 POF1BQ8WVV4 589 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 EDARADDQ8WWZ3 215 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 ATXN7L3BQ96GX2 97 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 NSL1Q96IY1 281 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 SCYL1Q96KG9 808 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 TBATAQ96M53 351 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 ZNF641Q96N77 438 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-221ENST00000553498 GPR78Q96P69 363 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 SLC22A12Q96S37 553 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 LYSMD1Q96S90 227 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 CYP2S1Q96SQ9 504 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 CORO1BQ9BR76 489 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 HTATIP2Q9BUP3 242 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 MECRQ9BV79 373 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 SLC46A2Q9BY10 475 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 LMAN2LQ9H0V9 348 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 CCDC68Q9H2F9 335 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 ATP13A3Q9H7F0 1226 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 TLE6Q9H808 572 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 CAB39LQ9H9S4 337 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 SLC40A1Q9NP59 571 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 XPR1Q9UBH6 696 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 APPL1Q9UKG1 709 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 HS3ST2Q9Y278 367 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 DNAJC16Q9Y2G8 782 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 PKP3Q9Y446 797 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 PCDHB1Q9Y5F3 818 aa7.3□□□□□ -1.24
ATXN3-221ENST00000553498 CCDC162PA2VCL2 907 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 LINC01553A4QN01 128 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 TRPC5OSA6NMA1 111 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 ANKRD65E5RJM6 399 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 H3BMM5 538 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 HDAC3O15379 428 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 STX7O15400 261 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 PHGDHO43175 533 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 MGRN1O60291 552 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SMIM24O75264 130 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 NDUFS3O75489 264 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 ESR1P03372 595 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 EPXP11678 715 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 AOC1P19801 751 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 MZF1P28698 734 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SERPINB3P29508 390 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 PRDX6P30041 224 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 PTGER3P43115 390 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 RGRP47804 291 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 RPL14P50914 215 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 ARSDP51689 593 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 EPHB1P54762 984 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 ERVFC1P60507 584 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 C1QTNF8P60827 252 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 IRX4P78413 519 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CYP4F8P98187 520 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 IRF9Q00978 393 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 PFKPQ01813 784 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CACNG1Q06432 222 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 DLG2Q15700 870 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 GPR33Q49SQ1 333 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 TECRLQ5HYJ1 363 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CFAP157Q5JU67 520 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CYB5D1Q6P9G0 228 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CNSTQ6PJW8 725 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 RAB44Q7Z6P3 723 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CEP97Q8IW35 865 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 BBS7Q8IWZ6 715 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SUGP1Q8IWZ8 645 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 RAVER1Q8IY67 606 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CHCHD4Q8N4Q1 142 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 PCDH20Q8N6Y1 951 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 LPCAT1Q8NF37 534 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 OR2AP1Q8NGE2 309 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SHKBP1Q8TBC3 707 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 DTX3LQ8TDB6 740 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 HCAR2Q8TDS4 363 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 MICAL1Q8TDZ2 1067 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SH3RF2Q8TEC5 729 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 HEXDCQ8WVB3 486 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 KCTD4Q8WVF5 259 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 KCNJ9Q92806 393 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 WBP2Q969T9 261 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 MYO19Q96H55 970 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 DNAJC1Q96KC8 554 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 LMLNQ96KR4 655 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 RILPQ96NA2 401 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SORT1Q99523 831 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SLC30A3Q99726 388 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 LBHD1Q9BQE6 289 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 AARSD1Q9BTE6 412 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CCDC28BQ9BUN5 200 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 GATA5Q9BWX5 397 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CPEB1Q9BZB8 566 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CDH19Q9H159 772 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 C1orf21Q9H246 121 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 TFB2MQ9H5Q4 396 aaKnown RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 NEUROD4Q9HD90 331 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms