RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 INSM1Q01101 510 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-204ENST00000553324 KLF1Q13351 362 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-204ENST00000553324 RPS6KA1Q15418 735 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 SLC1A5Q15758 541 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 HES3Q5TGS1 186 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 OGFOD3Q6PK18 319 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 SLC35F3Q8IY50 421 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 MAPK15Q8TD08 544 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 GPBAR1Q8TDU6 330 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 GRAMD1AQ96CP6 724 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 COX14Q96I36 57 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 MRGPRX2Q96LB1 330 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 SPATA13Q96N96 652 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 RMI1Q9H9A7 625 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 VPS18Q9P253 973 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 NFKBIL1Q9UBC1 381 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-204ENST00000553324 GULP1Q9UBP9 304 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 SUFUQ9UMX1 484 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 ZNF711Q9Y462 761 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 U3KQA8 63 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 PPFIA2O75334 1257 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 ASMTLO95671 621 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 MT-CO3P00414 261 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 FGF1P05230 155 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 CELA2BP08218 269 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-204ENST00000553324 STIP1P31948 543 aaKnown RBP15.24■□□□□ 0.03
SHMT2-204ENST00000553324 GNPDA1P46926 289 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 TARDBPQ13148 414 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHMT2-204ENST00000553324 LRP8Q14114 963 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 SIRPB2Q5JXA9 342 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 FAM182AQ5T1J6 154 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 MEI1Q5TIA1 1274 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 GUSBP11Q6P575 273 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 EFL1Q7Z2Z2 1120 aaKnown RBP15.24■□□□□ 0.03
SHMT2-204ENST00000553324 TRAM1L1Q8N609 369 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 DCBLD1Q8N8Z6 715 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 IPMKQ8NFU5 416 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 TRIM58Q8NG06 486 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 DTX3LQ8TDB6 740 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 ANP32BQ92688 251 aaKnown RBP15.24■□□□□ 0.03
SHMT2-204ENST00000553324 EID2BQ96D98 161 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 OXNAD1Q96HP4 312 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-204ENST00000553324 PLEKHG4BQ96PX9 1271 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 WDR24Q96S15 920 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 AGAP2Q99490 1192 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 SPATA16Q9BXB7 569 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 DPEP2Q9H4A9 486 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 LZTFL1Q9NQ48 299 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 GPSM3Q9Y4H4 160 aa15.24■□□□□ 0.03
SHMT2-204ENST00000553324 TP53BP1Q12888 1972 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-204ENST00000553324 ACACBO00763 2458 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 FAM149AA5PLN7 773 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 TRABD2BA6NFA1 517 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 GPR89AB7ZAQ6 455 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 INPP4BO15327 924 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 ZW10O43264 779 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 TCEA3O75764 348 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 FUCA1P04066 466 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 PIRTP0C851 137 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 GPR89BP0CG08 455 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 MYF5P13349 255 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 PNLIPP16233 465 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 GLB1P16278 677 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 POLD2P49005 469 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 CCZ1BP86790 482 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 CCZ1P86791 482 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-204ENST00000553324 ST3GAL2Q16842 350 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 PARP6Q2NL67 630 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 DOK6Q6PKX4 331 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 GALNT13Q8IUC8 556 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 SLC25A41Q8N5S1 370 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 GPR156Q8NFN8 814 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 DEPDC7Q96QD5 511 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 NRSN2Q9GZP1 204 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 CARD9Q9H257 536 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 CCDC86Q9H6F5 360 aaKnown RBP15.23■□□□□ 0.03
SHMT2-204ENST00000553324 C10orf88Q9H8K7 445 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 TRIM39Q9HCM9 518 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 SIRPGQ9P1W8 387 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 FEZ2Q9UHY8 353 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-204ENST00000553324 CNOT6Q9ULM6 557 aaKnown RBP15.23■□□□□ 0.03
SHMT2-204ENST00000553324 TMEM98Q9Y2Y6 226 aa15.23■□□□□ 0.03
SHMT2-204ENST00000553324 TDRD6O60522 2096 aaKnown RBP15.23■□□□□ 0.03
SHMT2-204ENST00000553324 LRRK1Q38SD2 2015 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 C2orf81A6NN90 581 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 PSMD3O43242 534 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 SLC25A14O95258 325 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-204ENST00000553324 ADCY8P40145 1251 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 PDE1BQ01064 536 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 CAMK2BQ13554 666 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 TCEA2Q15560 299 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 PYCR3Q53H96 274 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 ZNF569Q5MCW4 686 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 CDCP2Q5VXM1 449 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 KCTD16Q68DU8 428 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 RANBP10Q6VN20 620 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 ARHGEF18Q6ZSZ5 1173 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 GLT6D1Q7Z4J2 308 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 GPR26Q8NDV2 337 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 SLC35B2Q8TB61 432 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms