RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 LRRC66Q68CR7 880 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 ADAMTSL4Q6UY14 1074 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 CYP4V2Q6ZWL3 525 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 GALNT13Q8IUC8 556 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 MCOLN2Q8IZK6 566 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 SCAMP4Q969E2 229 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 AP2M1Q96CW1 435 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 MCCC1Q96RQ3 725 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 NUDCD1Q96RS6 583 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 AGAP2Q99490 1192 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 MGME1Q9BQP7 344 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 ZPBPQ9BS86 351 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 ABCG8Q9H221 673 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 TRIT1Q9H3H1 467 aaKnown RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 SIDT1Q9NXL6 827 aaKnown RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 PLEKHB1Q9UF11 243 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 PHTF1Q9UMS5 762 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 SIK3Q9Y2K2 1263 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 PRKAB1Q9Y478 270 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 KCTD3Q9Y597 815 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 RPS6KL1Q9Y6S9 549 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 A0A1W2PQ67 120 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 EIF3CLB5ME19 914 aaKnown RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 MKRN2OSH3BPM6 223 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 POLR1CO15160 346 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 INPP4BO15327 924 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 PDHA1P08559 390 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 DESP17661 470 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 GNLYP22749 145 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 NFKBIAP25963 317 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 DLSTP36957 453 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 COPB1P53618 953 aaKnown RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 LRP8Q14114 963 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 DPYSQ14117 519 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 MAP7Q14244 749 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 ERV3-1Q14264 604 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 BECN1Q14457 450 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 ARMC12Q5T9G4 340 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 TCTN3Q6NUS6 607 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 ASB18Q6ZVZ8 466 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 USP45Q70EL2 814 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 TMEM135Q86UB9 458 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 ESX1Q8N693 406 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 TEX19Q8NA77 164 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 PIH1D2Q8WWB5 315 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 SCRN2Q96FV2 425 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 ZNF599Q96NL3 588 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 EIF3CQ99613 913 aaKnown RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 AGPAT1Q99943 283 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 TBC1D10AQ9BXI6 508 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 ULBP3Q9BZM4 244 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 TRIM7Q9C029 511 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 CLSTN2Q9H4D0 955 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 SARS2Q9NP81 518 aaKnown RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 TAS2R14Q9NYV8 317 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 CWC15Q9P013 229 aaKnown RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 TBC1D29Q9UFV1 150 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 DACH1Q9UI36 760 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 CROTQ9UKG9 612 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 KCNK6Q9Y257 313 aa9.01□□□□□ -0.97
SYNE2-209ENST00000553308 OAS3Q9Y6K5 1087 aaKnown RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 MN1Q10571 1320 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 USP9YO00507 2555 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-209ENST00000553308 ZNF106Q9H2Y7 1883 aaKnown RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 A6NCN8 305 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 SNX2O60749 519 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 DNAJC6O75061 913 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 RFPL1O75677 317 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 AGFG2O95081 481 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 ASMTLO95671 621 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 PDGFAP04085 211 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 ATP1A1P05023 1023 aaKnown RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 RNF224P0DH78 156 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 ACP5P13686 325 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 MIPP30301 263 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 HSPA9P38646 679 aaKnown RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 EPHA4P54764 986 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 GFERP55789 205 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 FOXM1Q08050 763 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 MAMLD1Q13495 774 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 FKBP15Q5T1M5 1219 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 CDKAL1Q5VV42 579 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 CAPRIN2Q6IMN6 1127 aaKnown RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 ACAD10Q6JQN1 1059 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 IYDQ6PHW0 289 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 CHST15Q7LFX5 561 aaPredicted RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 CCDC13Q8IYE1 715 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 LZTR1Q8N653 840 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 GALNT6Q8NCL4 622 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 COX14Q96I36 57 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 RIOK2Q9BVS4 552 aaKnown RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 STN1Q9H668 368 aaKnown RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 PRDM8Q9NQV8 689 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 ETNK2Q9NVF9 386 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 CNOT8Q9UFF9 292 aaKnown RBP9□□□□□ -0.97
SYNE2-209ENST00000553308 ZNHIT2Q9UHR6 403 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 TLK1Q9UKI8 766 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 POLHQ9Y253 713 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 PPIL1Q9Y3C6 166 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms