RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 GRK6P43250 576 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 SRP54P61011 504 aaKnown RBP14.04□□□□□ -0.16
PTCH1-226ENST00000553011 SEMA5AQ13591 1074 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 TCEA2Q15560 299 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 TRIP13Q15645 432 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-226ENST00000553011 DGLUCYQ7Z3D6 616 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 RD3Q7Z3Z2 195 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 CREG2Q8IUH2 290 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 EID2Q8N6I1 236 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 ZNF548Q8NEK5 533 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-226ENST00000553011 OR56A4Q8NGH8 313 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 ATL2Q8NHH9 583 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 PTCD2Q8WV60 388 aaKnown RBP14.04□□□□□ -0.16
PTCH1-226ENST00000553011 LRRC45Q96CN5 670 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 SLC32A1Q9H598 525 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 NFKBIL1Q9UBC1 381 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-226ENST00000553011 CNOT6Q9ULM6 557 aaKnown RBP14.04□□□□□ -0.16
PTCH1-226ENST00000553011 ARL5AQ9Y689 179 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 GOLGA6L10A0A0M3HER8 536 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 SPAARA0A1B0GVQ0 90 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 ERI2A8K979 691 aaKnown RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 E7EVH7 732 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 PDE2AO00408 941 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 FFAR2O15552 330 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 PHF2O75151 1096 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 RASGRP1O95267 797 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 KRT14P02533 472 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 CEACAM5P06731 702 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 PYGLP06737 847 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 CELA2BP08218 269 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 GIMD1P0DJR0 217 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 KELP23276 732 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 GRIA1P42261 906 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 POLD2P49005 469 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 LMAN1P49257 510 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 VPS41P49754 854 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 HK3P52790 923 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 DCDC1P59894 354 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 C1orf61Q13536 156 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 TAF1AQ15573 450 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 PRRT3Q5FWE3 981 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 PPM1JQ5JR12 505 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 CCDC137Q6PK04 289 aaKnown RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 DOK6Q6PKX4 331 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 OR52K1Q8NGK4 314 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 BAHD1Q8TBE0 780 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 LMX1AQ8TE12 382 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 COX14Q96I36 57 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 HIC2Q96JB3 615 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 LRRC61Q9BV99 259 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 FRMD8Q9BZ67 464 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 SLC13A1Q9BZW2 595 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 SUDS3Q9H7L9 328 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 CYP4F12Q9HCS2 524 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 RAD18Q9NS91 495 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 SPASTQ9UBP0 616 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 FEZ2Q9UHY8 353 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-226ENST00000553011 MOSPD1Q9UJG1 213 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 TMEM98Q9Y2Y6 226 aa14.03□□□□□ -0.16
PTCH1-226ENST00000553011 PRSS38A1L453 326 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 TRIM38O00635 465 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 TNFRSF10CO14798 259 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 STX7O15400 261 aaKnown RBP14.02□□□□□ -0.17
PTCH1-226ENST00000553011 AQP9O43315 295 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 SUN1O94901 812 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 TNFP01375 233 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 FUCA1P04066 466 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 APRTP07741 180 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 CEACAM1P13688 526 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 LPOP22079 712 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-226ENST00000553011 SPAM1P38567 509 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 BLKP51451 505 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 TERF1P54274 439 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 ETF1P62495 437 aaKnown RBP14.02□□□□□ -0.17
PTCH1-226ENST00000553011 BASP1P80723 227 aaKnown RBP14.02□□□□□ -0.17
PTCH1-226ENST00000553011 SYT10Q6XYQ8 523 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 PPP1R21Q6ZMI0 780 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 LINC00523Q86TU6 105 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 TRAM1L1Q8N609 369 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 OR4K2Q8NGD2 314 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 BTN2A2Q8WVV5 523 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 PLEKHG4BQ96PX9 1271 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 ZSCAN5AQ9BUG6 496 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 CLPBQ9H078 707 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.17
PTCH1-226ENST00000553011 CDH19Q9H159 772 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 ARFGAP3Q9NP61 516 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 IL26Q9NPH9 171 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.02□□□□□ -0.17
PTCH1-226ENST00000553011 PKP3Q9Y446 797 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 OAS3Q9Y6K5 1087 aaKnown RBP14.02□□□□□ -0.17
PTCH1-226ENST00000553011 DGKBQ9Y6T7 804 aa14.02□□□□□ -0.17
PTCH1-226ENST00000553011 C2orf81A6NN90 581 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 GAPDHSO14556 408 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-226ENST00000553011 GPR39O43194 453 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 LDB2O43679 373 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms