RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PHF2O75151 1096 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 USP12O75317 370 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 SUN1O94901 812 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 BPIP17213 487 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 FNTAP49354 379 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 HK3P52790 923 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 SRP54P61011 504 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 PDE1BQ01064 536 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 BNIP3Q12983 259 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 TAF1AQ15573 450 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 ZNF542PQ5EBM4 170 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 TTC27Q6P3X3 843 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 ENPP7Q6UWV6 458 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 ERMP1Q7Z2K6 904 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 RBFAQ8N0V3 343 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 FSTL5Q8N475 847 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 TRAM1L1Q8N609 369 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 GPR26Q8NDV2 337 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 OR4C6Q8NH72 309 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 DTX3LQ8TDB6 740 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 COX14Q96I36 57 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 HIC2Q96JB3 615 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 CAMK1GQ96NX5 476 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 APOL2Q9BQE5 337 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 AP1M1Q9BXS5 423 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 RAB6BQ9NRW1 208 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 UCKL1Q9NWZ5 548 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 NLGN3Q9NZ94 848 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 SMARCAL1Q9NZC9 954 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 IL17CQ9P0M4 197 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 VPS18Q9P253 973 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 SPASTQ9UBP0 616 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 FTSJ1Q9UET6 329 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 SLC17A4Q9Y2C5 497 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 PKP3Q9Y446 797 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 SAR1BQ9Y6B6 198 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 RP1P56715 2156 aa11.65□□□□□ -0.54
TRAFD1-209ENST00000552896 COL27A1Q8IZC6 1860 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 SPEGQ15772 3267 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 NEMP2A6NFY4 417 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 C2orf81A6NN90 581 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 E7EVH7 732 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 SCAMP1O15126 338 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 FANCGO15287 622 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 CRTAMO95727 393 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 IVLP07476 585 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 ALPPL2P10696 532 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 ETS1P14921 441 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 RPL22P35268 128 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 SPAM1P38567 509 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 KCNJ1P48048 391 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 ZNF140P52738 457 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 MSLNQ13421 630 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 SPARCL1Q14515 664 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 ELOCQ15369 112 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 HS1BP3Q53T59 392 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 PRRT3Q5FWE3 981 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 ALS2CLQ60I27 953 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 PHYKPLQ8IUZ5 450 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 HID1Q8IV36 788 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 C17orf53Q8N3J3 647 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 SDR16C5Q8N3Y7 309 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 SLC25A45Q8N413 288 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 TAB3Q8N5C8 712 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 BRSK1Q8TDC3 778 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 GRK7Q8WTQ7 553 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 OR1E3Q8WZA6 343 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 TSACCQ96A04 125 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 MAGOHBQ96A72 148 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 VPS35Q96QK1 796 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 AGAP2Q99490 1192 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 DUSP23Q9BVJ7 150 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 SPATA16Q9BXB7 569 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 TCEAL2Q9H3H9 227 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 ETNK1Q9HBU6 452 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 ARL5AQ9Y689 179 aa11.64□□□□□ -0.55
TRAFD1-209ENST00000552896 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 GPR89AB7ZAQ6 455 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 LMO7DNF2Z398 122 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 GIPC1O14908 333 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 STX7O15400 261 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 FFAR2O15552 330 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 TNFSF14O43557 240 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 GAS8O95995 478 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 CEACAM5P06731 702 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 APRTP07741 180 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 ZSCAN5DPP0CG00 497 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 GPR89BP0CG08 455 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 GIMD1P0DJR0 217 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 LPOP22079 712 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 COILP38432 576 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 LMAN1P49257 510 aa11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 ETF1P62495 437 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-209ENST00000552896 BASP1P80723 227 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms