RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 HOMER3Q9NSC5 361 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 NCKIPSDQ9NZQ3 722 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 NFKBIL1Q9UBC1 381 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 FEZ2Q9UHY8 353 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 PNMA8BQ9ULN7 279 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 PKP3Q9Y446 797 aa18.38■□□□□ 0.53
PRPF40B-216ENST00000552301 E7EVH7 732 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 TPP1O14773 563 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 AURKAO14965 403 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 METTL18O95568 372 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 CKMT2P17540 419 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 ADRA1AP35348 466 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 HMGCLP35914 325 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 GNPDA1P46926 289 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 LMAN1P49257 510 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 DUSP3P51452 185 aaPredicted RBP18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 DNAJC3Q13217 504 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 SPARCL1Q14515 664 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 SIX1Q15475 284 aaPredicted RBP18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 PROX2Q3B8N5 592 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 RANBP10Q6VN20 620 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 GSTA5Q7RTV2 222 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 TRIM74Q86UV6 250 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 SDR16C5Q8N3Y7 309 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 GPR26Q8NDV2 337 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 EID2BQ96D98 161 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 BPIFA1Q9NP55 256 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 LRP4O75096 1905 aa18.37■□□□□ 0.53
PRPF40B-216ENST00000552301 C2orf81A6NN90 581 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 STX7O15400 261 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 USP12O75317 370 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 RFPL3O75679 317 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 ATP1A1P05023 1023 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 BPIP17213 487 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 PMLP29590 882 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 FDFT1P37268 417 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 OLIG2Q13516 323 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 PDPK2PQ6A1A2 396 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 DRICH1Q6PGQ1 229 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 TAF8Q7Z7C8 310 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 SLCO6A1Q86UG4 719 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 TTC30BQ8N4P2 665 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 TRAM1L1Q8N609 369 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 PNPLA1Q8N8W4 532 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 ADAMTS14Q8WXS8 1223 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 APOLD1Q96LR9 279 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 PLEKHG4BQ96PX9 1271 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 WDR24Q96S15 920 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 CLPBQ9H078 707 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 PAK5Q9P286 719 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 PYCARDQ9ULZ3 195 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 SLC17A4Q9Y2C5 497 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 PCDHGA1Q9Y5H4 931 aa18.36■□□□□ 0.53
PRPF40B-216ENST00000552301 USP27XA6NNY8 438 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 ERI2A8K979 691 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 FADS2P1A8MWK0 482 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 PPFIA2O75334 1257 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 CEACAM5P06731 702 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 IVLP07476 585 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 CELA2BP08218 269 aaPredicted RBP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 GIMD1P0DJR0 217 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 CDK4P11802 303 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 SPAM1P38567 509 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 POLD2P49005 469 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 RPIAP49247 311 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 ACADVLP49748 655 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 ILF3Q12906 894 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 C6orf132Q5T0Z8 1188 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 KCTD16Q68DU8 428 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 LVRNQ6Q4G3 990 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 NYAP1Q6ZVC0 841 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 MARK2Q7KZI7 788 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 LINC00523Q86TU6 105 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 PHYKPLQ8IUZ5 450 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 PDCD7Q8N8D1 485 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 FAM181AQ8N9Y4 354 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 COX14Q96I36 57 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 OR2M4Q96R27 311 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 GSDMCQ9BYG8 508 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 TOR4AQ9NXH8 423 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 ANGPTL2Q9UKU9 493 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 SUFUQ9UMX1 484 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 DRG1Q9Y295 367 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 TMEM98Q9Y2Y6 226 aa18.35■□□□□ 0.53
PRPF40B-216ENST00000552301 YY2O15391 372 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 SLC25A14O95258 325 aaPredicted RBP18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 CRTAMO95727 393 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 AP2A1O95782 977 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 GAS8O95995 478 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 LPOP22079 712 aaPredicted RBP18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 GNG11P61952 73 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 PDE1BQ01064 536 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 ILKQ13418 452 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 NR0B2Q15466 257 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 TAF1AQ15573 450 aaPredicted RBP18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 GALNT13Q8IUC8 556 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 KLHDC8BQ8IXV7 354 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 RASGEF1CQ8N431 466 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms