RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 VSIG1Q86XK7 387 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 RHOT2Q8IXI1 618 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 SLC35F3Q8IY50 421 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 CBARPQ8N350 705 aaPredicted RBP6.88□□□□□ -1.31
CBX5-204ENST00000550411 CNTD1Q8N815 330 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 KCTD6Q8NC69 237 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 PLA2G15Q8NCC3 412 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 ACRBPQ8NEB7 543 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 CXorf40AQ8TE69 158 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 ZDHHC1Q8WTX9 485 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 PIH1D2Q8WWB5 315 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 KRT35Q92764 455 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 NAT6Q93015 286 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 HDAC11Q96DB2 347 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 COQ10AQ96MF6 247 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 PANX2Q96RD6 677 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 LRRC61Q9BV99 259 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 LACRTQ9GZZ8 138 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 BRD8Q9H0E9 1235 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 CLMPQ9H6B4 373 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 SYNDIG1Q9H7V2 258 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 NT5MQ9NPB1 228 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 VTI1BQ9UEU0 232 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 PCDHGC4Q9Y5F7 938 aa6.88□□□□□ -1.31
CBX5-204ENST00000550411 A0A0A6YYK5 440 aaPredicted RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 PMS2P1A4D2B8 440 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PYCARD-AS1I3L0S3 204 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 KCNK1O00180 336 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 MATN3O15232 486 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 CASC3O15234 703 aaKnown RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 YY2O15391 372 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PSTPIP1O43586 416 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 SLC28A2O43868 658 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 GCATO75600 419 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 TM7SF2O76062 418 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 RECQL5O94762 991 aaPredicted RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 HEXIM1O94992 359 aaKnown RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 TNFSF15O95150 251 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 NDUFA10O95299 355 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PGLSO95336 258 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 SOD1P00441 154 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PRLP01236 227 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 ITGA2BP08514 1039 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PDHA1P08559 390 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 ARHGAP25P42331 645 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 MAGEA1P43355 309 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 RENBPP51606 427 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PDX1P52945 283 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 IFI35P80217 286 aaPredicted RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 PPIDQ08752 370 aaKnown RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 ELP6Q0PNE2 266 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 CLN3Q13286 438 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PRKD1Q15139 912 aaPredicted RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 IFI16Q16666 785 aaKnown RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 ALG11Q2TAA5 492 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PRRT3Q5FWE3 981 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 FAXCQ5TGI0 409 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 C11orf63Q6NUN7 778 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 ESRP1Q6NXG1 681 aaKnown RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 MACC1Q6ZN28 852 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 RFLNAQ6ZTI6 216 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 B4GALNT4Q76KP1 1039 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 HSD11B1LQ7Z5J1 315 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 LRRC49Q8IUZ0 686 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 CCDC170Q8IYT3 715 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 LRRC57Q8N9N7 239 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PDXPQ96GD0 296 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 TBATAQ96M53 351 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 CCNL2Q96S94 520 aaPredicted RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 SEMA3CQ99985 751 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 CCDC3Q9BQI4 270 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 TDRD1Q9BXT4 1180 aaKnown RBP6.87□□□□□ -1.31
CBX5-204ENST00000550411 CEP41Q9BYV8 373 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 SLC13A1Q9BZW2 595 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 CLPBQ9H078 707 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 FGF22Q9HCT0 170 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 LCMT1Q9UIC8 334 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PADI4Q9UM07 663 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 OR1A2Q9Y585 309 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 PCDHA13Q9Y5I0 950 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 DUSP10Q9Y6W6 482 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 HIVEP3Q5T1R4 2406 aa6.87□□□□□ -1.31
CBX5-204ENST00000550411 hCG_1818297A0A087WSY0 165 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.86□□□□□ -1.31
CBX5-204ENST00000550411 CFAP69A5D8W1 941 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 TMEM202A6NGA9 273 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 A8MX80 341 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 LMO7DNF2Z398 122 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 NTN3O00634 580 aaPredicted RBP6.86□□□□□ -1.31
CBX5-204ENST00000550411 TOR1BO14657 336 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 WISP1O95388 367 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 PDGFAP04085 211 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 PCCBP05166 539 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 ALPIP09923 528 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 ELFN1P0C7U0 828 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 KRT10P13645 584 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 TNNT1P13805 278 aa6.86□□□□□ -1.31
CBX5-204ENST00000550411 CTSEP14091 401 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms