RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	ZFYVE1	Q9HBF4	777 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	MAGEE1	Q9HCI5	957 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	APOBEC3B	Q9UH17	382 aa	Known RBP	11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	PRKAB1	Q9Y478	270 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	ARL5A	Q9Y689	179 aa		11.16	□□□□□ -0.62
RAB5B-208	ENST00000550283	COL5A1	P20908	1838 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	GOLGA6L9	A6NEM1	432 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	YY2	O15391	372 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	AQP9	O43315	295 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	HYAL3	O43820	417 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	DFNA5	O60443	496 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	MAGEC1	O60732	1142 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	MTX2	O75431	263 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	EPO	P01588	193 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	MYCLP1	P12525	358 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	CA4	P22748	312 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	RPL22	P35268	128 aa	Known RBP	11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	GPR1	P46091	355 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	GEM	P55040	296 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	PPARD	Q03181	441 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	LONRF2	Q1L5Z9	754 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	CCDC157	Q569K6	752 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	ADAMTSL4	Q6UY14	1074 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	MARK2	Q7KZI7	788 aa	Known RBP	11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	ZNF765	Q7L2R6	523 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	GLRX5	Q86SX6	157 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	DCP2	Q8IU60	420 aa	Known RBP	11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	OXR1	Q8N573	874 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	PDCD7	Q8N8D1	485 aa	Known RBP	11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	OR56A4	Q8NGH8	313 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	OR4C6	Q8NH72	309 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	BLOC1S5	Q8TDH9	187 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	OSBPL9	Q96SU4	736 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	GPR63	Q9BZJ6	419 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	ETNK1	Q9HBU6	452 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	CYP4F12	Q9HCS2	524 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	IL17C	Q9P0M4	197 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	KL	Q9UEF7	1012 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	KLK13	Q9UKR3	277 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	JRKL	Q9Y4A0	524 aa		11.15	□□□□□ -0.62
RAB5B-208	ENST00000550283	ASPM	Q8IZT6	3477 aa		11.15	□□□□□ -0.63
RAB5B-208	ENST00000550283	TCRBV7S3A2	A0A539	114 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	PRSS38	A1L453	326 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	CCDC78	A2IDD5	438 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A9	O60656	530 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	EML2	O95834	649 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	IFNB1	P01574	187 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	HOXC4	P09017	264 aa	Predicted RBP	11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	PRSS56	P0CW18	603 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A6	P19224	532 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A1	P22309	533 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A4	P22310	534 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	AK4	P27144	223 aa	Predicted RBP	11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A3	P35503	534 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A5	P35504	534 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	ACADVL	P49748	655 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	FOXC1	Q12948	553 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	TRIP13	Q15645	432 aa	Predicted RBP	11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	CCNG2	Q16589	344 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	PARP6	Q2NL67	630 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	ITPRIPL1	Q6GPH6	555 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	ARHGEF18	Q6ZSZ5	1173 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	SLC35F3	Q8IY50	421 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	NRSN1	Q8IZ57	195 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	OR13C4	Q8NGS5	318 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	FAM174A	Q8TBP5	190 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	APOLD1	Q96LR9	279 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	TBL1Y	Q9BQ87	522 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	FAM83D	Q9H4H8	585 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	SLC32A1	Q9H598	525 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A7	Q9HAW7	530 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A10	Q9HAW8	530 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	UGT1A8	Q9HAW9	530 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	IL26	Q9NPH9	171 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	HAUS2	Q9NVX0	235 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	FTSJ1	Q9UET6	329 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	RABGEF1	Q9UJ41	708 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	SUFU	Q9UMX1	484 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	SNX12	Q9UMY4	172 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZNF148	Q9UQR1	794 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	SLC17A4	Q9Y2C5	497 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	CEP295	Q9C0D2	2601 aa		11.14	□□□□□ -0.63
RAB5B-208	ENST00000550283	WDFY3	Q8IZQ1	3526 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	CACNB4	O00305	520 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	PDE2A	O00408	941 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	TOR1B	O14657	336 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	YKT6	O15498	198 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZSCAN12	O43309	604 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	LDB2	O43679	373 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	DNAJC6	O75061	913 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	ANXA9	O76027	345 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	RASGRP1	O95267	797 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	LDOC1	O95751	146 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	FGF1	P05230	155 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	HLA-DPA1	P20036	260 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	TEAD1	P28347	426 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	GNPDA1	P46926	289 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	TERF1	P54274	439 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms