RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PIAS2O75928 621 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 PYGLP06737 847 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 LPOP22079 712 aaPredicted RBP22.4■■□□□ 1.18
BRF1-216ENST00000550208 DGKAP23743 735 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 POLD2P49005 469 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 DCDC1P59894 354 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 HNRNPKP61978 463 aaKnown RBP eCLIP22.4■■□□□ 1.18
BRF1-216ENST00000550208 GPS1Q13098 491 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 PUM1Q14671 1186 aaKnown RBP eCLIP22.4■■□□□ 1.18
BRF1-216ENST00000550208 PPP1R21Q6ZMI0 780 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 TRIM74Q86UV6 250 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 NAXDQ8IW45 347 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 PHACTR4Q8IZ21 702 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 DEFB124Q8NES8 71 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 RHBDD1Q8TEB9 315 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 CDH19Q9H159 772 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 FGF22Q9HCT0 170 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 IL26Q9NPH9 171 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.4■■□□□ 1.18
BRF1-216ENST00000550208 NFKBIL1Q9UBC1 381 aaPredicted RBP22.4■■□□□ 1.18
BRF1-216ENST00000550208 KLQ9UEF7 1012 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 TMEM98Q9Y2Y6 226 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 PKP3Q9Y446 797 aa22.4■■□□□ 1.18
BRF1-216ENST00000550208 TNFRSF10CO14798 259 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 CRTAMO95727 393 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 FUCA1P04066 466 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 CEACAM5P06731 702 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 KELP23276 732 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 C1orf61Q13536 156 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 CERCAMQ5T4B2 595 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 KLHL7Q8IXQ5 586 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 TRAM1L1Q8N609 369 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 DNAAF3Q8N9W5 541 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 OR4K2Q8NGD2 314 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 GRK7Q8WTQ7 553 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 COX14Q96I36 57 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 FRMD8Q9BZ67 464 aaPredicted RBP22.39■■□□□ 1.17
BRF1-216ENST00000550208 CASS4Q9NQ75 786 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 MOSPD1Q9UJG1 213 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 DMXL1Q9Y485 3027 aa22.39■■□□□ 1.17
BRF1-216ENST00000550208 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.38■■□□□ 1.17
BRF1-216ENST00000550208 TCRBV7S3A2A0A539 114 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 H3BM21 787 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 FLRT2O43155 660 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 LDB2O43679 373 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 RASGRP1O95267 797 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 TNFP01375 233 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 CSRP1P21291 193 aaKnown RBP22.38■■□□□ 1.17
BRF1-216ENST00000550208 PTGIRP43119 386 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 HK3P52790 923 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 CDH17Q12864 832 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 POU6F1Q14863 301 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 DOK6Q6PKX4 331 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 EID2Q8N6I1 236 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 OR13C4Q8NGS5 318 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 LMX1AQ8TE12 382 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 PTCD2Q8WV60 388 aaKnown RBP22.38■■□□□ 1.17
BRF1-216ENST00000550208 BTN2A2Q8WVV5 523 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 PLEKHG4BQ96PX9 1271 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 ZSCAN5AQ9BUG6 496 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 SLC13A1Q9BZW2 595 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 CYP4F12Q9HCS2 524 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 EIF2B3Q9NR50 452 aaKnown RBP22.38■■□□□ 1.17
BRF1-216ENST00000550208 APOBEC3BQ9UH17 382 aaKnown RBP22.38■■□□□ 1.17
BRF1-216ENST00000550208 PCYOX1Q9UHG3 505 aa22.38■■□□□ 1.17
BRF1-216ENST00000550208 CBFA2T3O75081 653 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 ECEL1O95672 775 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 SPAM1P38567 509 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 BLKP51451 505 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 TMPRSS15P98073 1019 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 CHRNA6Q15825 494 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 PRRT3Q5FWE3 981 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 ZNF648Q5T619 568 aaPredicted RBP22.37■■□□□ 1.17
BRF1-216ENST00000550208 ZDHHC20Q5W0Z9 365 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 ZNF548Q8NEK5 533 aaPredicted RBP22.37■■□□□ 1.17
BRF1-216ENST00000550208 PDXPQ96GD0 296 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 CLPBQ9H078 707 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 ARFGAP3Q9NP61 516 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 SPASTQ9UBP0 616 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 PCOLCE2Q9UKZ9 415 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 TMPRSS11EQ9UL52 423 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 SLC17A4Q9Y2C5 497 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 OAS3Q9Y6K5 1087 aaKnown RBP22.37■■□□□ 1.17
BRF1-216ENST00000550208 DGKBQ9Y6T7 804 aa22.37■■□□□ 1.17
BRF1-216ENST00000550208 SCN8AQ9UQD0 1980 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 GIPC1O14908 333 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 AQP9O43315 295 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A9O60656 530 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 PPFIA2O75334 1257 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 KCNK5O95279 499 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 ASMTLO95671 621 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 GAS8O95995 478 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 GIMD1P0DJR0 217 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A6P19224 532 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A1P22309 533 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A4P22310 534 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 CA5AP35218 305 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A3P35503 534 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A5P35504 534 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 GRK6P43250 576 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms