RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	ALG14	Q96F25	216 aa		4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	F2RL3	Q96RI0	385 aa		4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	TMEM47	Q9BQJ4	181 aa		4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	RBM4	Q9BWF3	364 aa	Known RBP	4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	ZNF696	Q9H7X3	374 aa		4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	DDX43	Q9NXZ2	648 aa	Known RBP	4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	DLGAP4	Q9Y2H0	992 aa		4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	DGKB	Q9Y6T7	804 aa		4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	PTPRC	P08575	1304 aa		4.41	□□□□□ -1.7
CNOT2-222	ENST00000550155	PMS2P5	A8MQ11	134 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	VCY	O14598	125 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	HS3ST1	O14792	307 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	FTCD	O95954	541 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	LDLR	P01130	860 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	POLB	P06746	335 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	PAX1	P15863	534 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	CPOX	P36551	454 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	TAS2R38	P59533	333 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	MYLK3	Q32MK0	819 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	DCST1	Q5T197	706 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	FAM69A	Q5T7M9	428 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	OR7E24	Q6IFN5	339 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	FAM171B	Q6P995	826 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	SLC27A1	Q6PCB7	646 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	CEACAM20	Q6UY09	585 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF354C	Q86Y25	554 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	CADM4	Q8NFZ8	388 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	OR10V1	Q8NGI7	309 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF501	Q96CX3	271 aa	Predicted RBP	4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	RANBP17	Q9H2T7	1088 aa	Known RBP	4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	HCFC1R1	Q9NWW0	138 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	POLG2	Q9UHN1	485 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	HAO1	Q9UJM8	370 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	FBXL2	Q9UKC9	423 aa		4.4	□□□□□ -1.71
CNOT2-222	ENST00000550155	IGLV5-45	A0A087WSX0	123 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	ANTXRL	A6NF34	631 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	PCDH7	O60245	1069 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	TUBB	P07437	444 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	FAM106CP	P0CH98	169 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	FGF5	P12034	268 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	XBP1	P17861	261 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	EIF3B	P55884	814 aa	Known RBP	4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	TUBB4B	P68371	445 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	DCTN2	Q13561	401 aa	Known RBP	4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	FGFBP1	Q14512	234 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	COL28A1	Q2UY09	1125 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	TMEM30B	Q3MIR4	351 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	FAM76A	Q8TAV0	307 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	THAP6	Q8TBB0	222 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	RNF125	Q96EQ8	232 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	SCRN2	Q96FV2	425 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	ST6GAL2	Q96JF0	529 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	PCGF1	Q9BSM1	259 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	ASAH2	Q9NR71	780 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	SLC6A13	Q9NSD5	602 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	SARDH	Q9UL12	918 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	TAF1	P21675	1872 aa		4.39	□□□□□ -1.71
CNOT2-222	ENST00000550155	EIF3CL	B5ME19	914 aa	Known RBP	4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	HOXC11	O43248	304 aa	Predicted RBP	4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	SYNGR3	O43761	229 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	SEC31A	O94979	1220 aa	Known RBP	4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	INHBA	P08476	426 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF23	P17027	643 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	PLIN5	Q00G26	463 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	MAD2L1	Q13257	205 aa	Predicted RBP	4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	SFMBT2	Q5VUG0	894 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	HIST2H2BC	Q6DN03	193 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	HIST2H2BD	Q6DRA6	164 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	MAP7D3	Q8IWC1	876 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	BEST3	Q8N1M1	668 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	GTF3C6	Q969F1	213 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	STAMBPL1	Q96FJ0	436 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	GRAMD2B	Q96HH9	432 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF354B	Q96LW1	612 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	USP44	Q9H0E7	712 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	KIF9	Q9HAQ2	790 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	BRF2	Q9HAW0	419 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	KLHL20	Q9Y2M5	609 aa		4.38	□□□□□ -1.71
CNOT2-222	ENST00000550155	SNAP23	O00161	211 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	NCAM2	O15394	837 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	IGHV4-39	P01824	125 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	HOXC9	P31274	260 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	MAPK9	P45984	424 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	NR0B1	P51843	470 aa	Known RBP	4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	DECR1	Q16698	335 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF876P	Q49A33	203 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	ARHGAP11A	Q6P4F7	1023 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	PLEKHM3	Q6ZWE6	761 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	CCDC13	Q8IYE1	715 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF248	Q8NDW4	579 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	KLHDC9	Q8NEP7	349 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	OR52I2	Q8NH67	350 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	NFKBID	Q8NI38	313 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	HMGCLL1	Q8TB92	370 aa		4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms