RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HES6Q96HZ4 224 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 HIC2Q96JB3 615 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 GPR63Q9BZJ6 419 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 CDH19Q9H159 772 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 SUDS3Q9H7L9 328 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 ZFYVE1Q9HBF4 777 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 RAD18Q9NS91 495 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 NFKBIL1Q9UBC1 381 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 GUCA1BQ9UMX6 200 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 CLCA2Q9UQC9 943 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 PKD1L2Q7Z442 2459 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 CCDC175P0C221 793 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 GNPDA1P46926 289 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 ILF3Q12906 894 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 MPP3Q13368 585 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 DARS2Q6PI48 645 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 TRIM74Q86UV6 250 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 CACTIN-AS1Q8N1I8 211 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 PDCD7Q8N8D1 485 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 DCBLD1Q8N8Z6 715 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 TTC13Q8NBP0 860 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 IPMKQ8NFU5 416 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 MAPK15Q8TD08 544 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 NXPE2Q96DL1 559 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 FAM118BQ9BPY3 351 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 FSD1LQ9BXM9 530 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 ABCG4Q9H172 646 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 FAM83DQ9H4H8 585 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 C10orf88Q9H8K7 445 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 TRNAU1APQ9NX07 287 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 GULP1Q9UBP9 304 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 PADI4Q9UM07 663 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 SUFUQ9UMX1 484 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 SHOC2Q9UQ13 582 aa17.14■□□□□ 0.33
CHMP1A-208ENST00000550102 INPP4BO15327 924 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 KCNN4O15554 427 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 ANXA9O76027 345 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 EPOP01588 193 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 HLA-DPA1P20036 260 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 GEMP55040 296 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 CAMK2BQ13554 666 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 SIRPB2Q5JXA9 342 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 LRRC8AQ8IWT6 810 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 FAM46DQ8NEK8 389 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 UBE2Q2Q8WVN8 375 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 COX14Q96I36 57 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 MRGPRX2Q96LB1 330 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 DEPDC7Q96QD5 511 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 WDR24Q96S15 920 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 AGAP2Q99490 1192 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 GSDMCQ9BYG8 508 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 VPS18Q9P253 973 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 SPO11Q9Y5K1 396 aa17.13■□□□□ 0.33
CHMP1A-208ENST00000550102 DSPP15924 2871 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 BPTFQ12830 3046 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 LOC285095A0A1B0GVY8 99 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 FADS2P1A8MWK0 482 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 B4DGG1 531 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 MT-CO3P00414 261 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 FGF1P05230 155 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 CHRNA4P43681 627 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 POLD2P49005 469 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 TARDBPQ13148 414 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 KLF1Q13351 362 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 SLC1A5Q15758 541 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 PERM1Q5SV97 790 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 SEL1L2Q5TEA6 688 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 ALS2CLQ60I27 953 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 TMC3Q7Z5M5 1100 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 CCL4L1Q8NHW4 92 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 GPBAR1Q8TDU6 330 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 PTCD2Q8WV60 388 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 EID2BQ96D98 161 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 SCARF2Q96GP6 870 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 SPATA13Q96N96 652 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 PPP1R2P1Q96PQ5 205 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 ALS2CR12Q96Q35 445 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 ZSCAN5AQ9BUG6 496 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 TRABDQ9H4I3 376 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 HACD3Q9P035 362 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 TMEM98Q9Y2Y6 226 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 WDFY3Q8IZQ1 3526 aa17.12■□□□□ 0.33
CHMP1A-208ENST00000550102 TRABD2BA6NFA1 517 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 ASMTLO95671 621 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 FUCA1P04066 466 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 PSMB4P28070 264 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 ADCY8P40145 1251 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 CCZ1BP86790 482 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 CCZ1P86791 482 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 PEX6Q13608 980 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 PRPSAP1Q14558 356 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 ANKRD20A2Q5SQ80 823 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 ANKRD20A1Q5TYW2 823 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 ANKRD20A3Q5VUR7 823 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 CDCP2Q5VXM1 449 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 PDPK2PQ6A1A2 396 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 MARK2Q7KZI7 788 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms