RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 HSPH1Q92598 858 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 PMEPA1Q969W9 287 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 SH3KBP1Q96B97 665 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 CSPG4P5Q96PW8 444 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 ABCG8Q9H221 673 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.5□□□□□ -0.25
TROAP-211ENST00000549891 PDP2Q9P2J9 529 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 MYO1AQ9UBC5 1043 aa13.5□□□□□ -0.25
TROAP-211ENST00000549891 SOD1P00441 154 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 SLC2A4P14672 509 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 CTPS1P17812 591 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 CA4P22748 312 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 CES1P23141 567 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 MAP4P27816 1152 aaKnown RBP13.49□□□□□ -0.25
TROAP-211ENST00000549891 ITKQ08881 620 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 PIGHQ14442 188 aaPredicted RBP13.49□□□□□ -0.25
TROAP-211ENST00000549891 CEACAM20Q6UY09 585 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 MARK2Q7KZI7 788 aaKnown RBP13.49□□□□□ -0.25
TROAP-211ENST00000549891 NLGN4XQ8N0W4 816 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 NLGN4YQ8NFZ3 816 aaPredicted RBP13.49□□□□□ -0.25
TROAP-211ENST00000549891 SLC37A2Q8TED4 501 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 TEKT4Q8WW24 435 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 PIH1D2Q8WWB5 315 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 SLC45A3Q96JT2 553 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 POLR1EQ9GZS1 481 aaKnown RBP13.49□□□□□ -0.25
TROAP-211ENST00000549891 GPN2Q9H9Y4 310 aaPredicted RBP13.49□□□□□ -0.25
TROAP-211ENST00000549891 NT5MQ9NPB1 228 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 ETNK2Q9NVF9 386 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 OCIAD1Q9NX40 245 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 AIPL1Q9NZN9 384 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 TMEM9Q9P0T7 183 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 VPS18Q9P253 973 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 CD84Q9UIB8 345 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 PILRAQ9UKJ1 303 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 TMEM98Q9Y2Y6 226 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 COL12A1Q99715 3063 aa13.49□□□□□ -0.25
TROAP-211ENST00000549891 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 CYSRT1A8MQ03 144 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 FZD6O60353 706 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 ASMTLO95671 621 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 TRBC1P01850 177 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 PDHA1P08559 390 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 RARAP10276 462 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 IL1R2P27930 398 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 PRKCIP41743 596 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 MC2RQ01718 297 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 HHEXQ03014 270 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 PTSQ03393 145 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 KLHL30Q0D2K2 578 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 NCAPHQ15003 741 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 ANKS6Q68DC2 871 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 TIGD7Q6NT04 549 aaPredicted RBP13.48□□□□□ -0.25
TROAP-211ENST00000549891 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
TROAP-211ENST00000549891 SLC9B2Q86UD5 537 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 TEX26Q8N6G2 289 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 BMPERQ8N8U9 685 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 AVL9Q8NBF6 648 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.48□□□□□ -0.25
TROAP-211ENST00000549891 NAT10Q9H0A0 1025 aaKnown RBP13.48□□□□□ -0.25
TROAP-211ENST00000549891 HSD3B7Q9H2F3 369 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 TRIT1Q9H3H1 467 aaKnown RBP13.48□□□□□ -0.25
TROAP-211ENST00000549891 RMI1Q9H9A7 625 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 RCOR3Q9P2K3 495 aaPredicted RBP13.48□□□□□ -0.25
TROAP-211ENST00000549891 ZNHIT2Q9UHR6 403 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 PLEKHM1Q9Y4G2 1056 aa13.48□□□□□ -0.25
TROAP-211ENST00000549891 DOPEY2Q9Y3R5 2298 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 TRBV23OR9-2A0A075B6M9 112 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 DDX3XO00571 662 aaKnown RBP eCLIP13.47□□□□□ -0.255e-12■□□□□ 8.3
TROAP-211ENST00000549891 MAP3K6O95382 1288 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 STC1P52823 247 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 EPHA4P54764 986 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 MC1RQ01726 317 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 KRT81Q14533 505 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 PTPRRQ15256 657 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 COLEC12Q5KU26 742 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 SNAP47Q5SQN1 464 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 CCDC122Q5T0U0 273 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.47□□□□□ -0.25
TROAP-211ENST00000549891 CHST15Q7LFX5 561 aaPredicted RBP13.47□□□□□ -0.25
TROAP-211ENST00000549891 KDELC2Q7Z4H8 507 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 ARHGAP22Q7Z5H3 698 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 TRIM74Q86UV6 250 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 ZNF761Q86XN6 746 aaPredicted RBP13.47□□□□□ -0.25
TROAP-211ENST00000549891 PTRH1Q86Y79 214 aaKnown RBP13.47□□□□□ -0.25
TROAP-211ENST00000549891 AOPEPQ8N6M6 819 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 C9orf43Q8TAL5 461 aaPredicted RBP13.47□□□□□ -0.25
TROAP-211ENST00000549891 RTP4Q96DX8 246 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 COX14Q96I36 57 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 HERPUD2Q9BSE4 406 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 ISCUQ9H1K1 167 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 EPB41L1Q9H4G0 881 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 PCDH18Q9HCL0 1135 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 SARS2Q9NP81 518 aaKnown RBP13.47□□□□□ -0.25
TROAP-211ENST00000549891 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
TROAP-211ENST00000549891 FBXO8Q9NRD0 319 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 AMACRQ9UHK6 382 aa13.47□□□□□ -0.25
TROAP-211ENST00000549891 KIR2DS5A0A0G2JLQ3 304 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms