RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 STAG3L4Q8TBR4 150 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SPPL3Q8TCT6 385 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 TSPEARQ8WU66 669 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 UBTD2Q8WUN7 234 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SCYL1Q96KG9 808 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 RILPQ96NA2 401 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SPON2Q9BUD6 331 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 ZDHHC7Q9NXF8 308 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 DHRS7Q9Y394 339 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 PLXNA2O75051 1894 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 NOTCH4Q99466 2003 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 OR51F1A6NGY5 319 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SYCE1LA8MT33 242 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 UBFD1O14562 309 aaKnown RBP9.93□□□□□ -0.82
RAB5B-206ENST00000549505 VPS4BO75351 444 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CXCL14O95715 111 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PYGLP06737 847 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ALDH18A1P54886 795 aaKnown RBP9.93□□□□□ -0.82
RAB5B-206ENST00000549505 COQ5Q5HYK3 327 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 GPR158Q5T848 1215 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ARMC12Q5T9G4 340 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 OGFOD2Q6N063 350 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PHYKPLQ8IUZ5 450 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 BBS7Q8IWZ6 715 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ULK2Q8IYT8 1036 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 APCDD1Q8J025 514 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CEP70Q8NHQ1 597 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CD200R1Q8TD46 325 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SH3RF2Q8TEC5 729 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SUDS3Q9H7L9 328 aaPredicted RBP9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SMOXQ9NWM0 555 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PLXNB3Q9ULL4 1909 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 DNAH12Q6ZR08 3092 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 TSPAN3O60637 253 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SMIM24O75264 130 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ENO1P06733 434 aaKnown RBP9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ITGAXP20702 1163 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PGM1P36871 562 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 MTTPP55157 894 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 RHOAP61586 193 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 OR4D1Q15615 310 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CUZD1Q86UP6 607 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 GALNT13Q8IUC8 556 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CMTM8Q8IZV2 173 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CARNMT1Q8N4J0 409 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 GIMAP7Q8NHV1 300 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 JADE3Q92613 823 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ASAH2Q9NR71 780 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CFAP97Q9P2B7 532 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 TBC1D14Q9P2M4 693 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 APPL1Q9UKG1 709 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 STK38LQ9Y2H1 464 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 KIAA1549LQ6ZVL6 1849 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 FKBP6O75344 327 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 IGSF6O95976 241 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 GLUD1P00367 558 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PTPN2P17706 415 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PIK3R1P27986 724 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 DCDC1P59894 354 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 RAD51Q06609 339 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CDH18Q13634 790 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SQLEQ14534 574 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PCBP2Q15366 365 aaKnown RBP eCLIP9.93□□□□□ -0.823e-8■■■■■ 31.4
RAB5B-206ENST00000549505 SMU1Q2TAY7 513 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ACSBG2Q5FVE4 666 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PITRM1Q5JRX3 1037 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 KDELC2Q7Z4H8 507 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SNX20Q7Z614 316 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF354CQ86Y25 554 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 TMEM126BQ8IUX1 230 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PIANPQ8IYJ0 282 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CLYBLQ8N0X4 340 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PHTF2Q8N3S3 785 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 DNAJC5GQ8N7S2 189 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 LPCAT1Q8NF37 534 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 OR2AP1Q8NGE2 309 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 FBXO27Q8NI29 283 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 AUTS2Q8WXX7 1259 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 FUBP1Q96AE4 644 aaKnown RBP9.93□□□□□ -0.82
RAB5B-206ENST00000549505 SAMD11Q96NU1 681 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 PLEKHG4BQ96PX9 1271 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 GCNAQ96QF7 691 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 BAIAP2L1Q9UHR4 511 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 C15orf41Q9Y2V0 281 aa9.93□□□□□ -0.82
RAB5B-206ENST00000549505 CCDC78A2IDD5 438 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 CBSLP0DN79 551 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 MC4RP32245 332 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 CBSP35520 551 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 PEX19P40855 299 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 FPGSQ05932 587 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 VWA5B1Q5TIE3 1220 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 EFL1Q7Z2Z2 1120 aaKnown RBP9.92□□□□□ -0.82
RAB5B-206ENST00000549505 SCRN2Q96FV2 425 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 DUS3LQ96G46 650 aaKnown RBP9.92□□□□□ -0.82
RAB5B-206ENST00000549505 ATP13A3Q9H7F0 1226 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 RDH14Q9HBH5 336 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 CD248Q9HCU0 757 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 SLC7A8Q9UHI5 535 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 PCDHGC4Q9Y5F7 938 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms