RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 AWAT1Q58HT5 328 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SLC39A4Q6P5W5 647 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 KLHL24Q6TFL4 600 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 DENND5BQ6ZUT9 1274 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 TMEM199Q8N511 208 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 USP38Q8NB14 1042 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 Q8NFD4 153 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 TFAP2BQ92481 460 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SAAL1Q96ER3 474 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 FAR2Q96K12 515 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 TREX2Q9BQ50 279 aaPredicted RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 NXF3Q9H4D5 531 aaKnown RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 NKIRAS2Q9NYR9 191 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 TAS2R10Q9NYW0 307 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 CACNG4Q9UBN1 327 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SLC25A10Q9UBX3 287 aaPredicted RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 KCNE5Q9UJ90 142 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 B3GNT3Q9Y2A9 372 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 FAM237BA0A1B0GVD1 139 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SYCE3A1L190 88 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 FRMD3A2A2Y4 597 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 TSPAN4O14817 238 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 PMPCBO75439 489 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 MED14OSP0DP75 135 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 MYOGP15173 224 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 ARSAP15289 507 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 JUNBP17275 347 aaPredicted RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 ACO1P21399 889 aaKnown RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 SFPQP23246 707 aaKnown RBP eCLIP3.89□□□□□ -1.79
APAF1-208ENST00000549007 CYP2J2P51589 502 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SPAG1Q07617 926 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 PTP4A2Q12974 167 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 MAPK6Q16659 721 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 MTFR2Q6P444 385 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 ZNF720Q7Z2F6 126 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 ZNF410Q86VK4 478 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 THNSL1Q8IYQ7 743 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SYCP3Q8IZU3 236 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 LGI4Q8N135 537 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 CPEB3Q8NE35 698 aaKnown RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 RFWD2Q8NHY2 731 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SCFD1Q8WVM8 642 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 SEPT8Q92599 483 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 FAM120BQ96EK7 910 aaKnown RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 VPS50Q96JG6 964 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 NR1H4Q96RI1 486 aaPredicted RBP3.89□□□□□ -1.79
APAF1-208ENST00000549007 CBWD1Q9BRT8 395 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 TCHPQ9BT92 498 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 PDZD7Q9H5P4 517 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 EPHX3Q9H6B9 360 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 POLR1BQ9H9Y6 1135 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 MAGEF1Q9HAY2 307 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.89□□□□□ -1.79
APAF1-208ENST00000549007 ENTPD2Q9Y5L3 495 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 ZMYM2Q9UBW7 1377 aa3.89□□□□□ -1.79
APAF1-208ENST00000549007 MYH11P35749 1972 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 MBD3O95983 291 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 TUBBP07437 444 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 GAP43P17677 238 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PRPH2P23942 346 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 TNFSF9P41273 254 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 LIG4P49917 911 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PPP5CP53041 499 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 CLNS1AP54105 237 aaKnown RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 ARHGAP8P85298 464 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PSG6Q00889 435 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 THOC5Q13769 683 aaKnown RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 HLXQ14774 488 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 DPCR1Q3MIW9 517 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 GLRA4Q5JXX5 417 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 UBXN11Q5T124 520 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 ATF7IP2Q5U623 682 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 GKAP1Q5VSY0 366 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 MOB3CQ70IA8 216 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 RPAINQ86UA6 219 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 FKBP10Q96AY3 582 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 ABHD1Q96SE0 405 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 MACROD1Q9BQ69 325 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PAAF1Q9BRP4 392 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 AKIP1Q9NQ31 210 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 INTS13Q9NVM9 706 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 KCND2Q9NZV8 630 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 ZNF711Q9Y462 761 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 KCNE2Q9Y6J6 123 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 TANC1Q9C0D5 1861 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 LTBP2Q14767 1821 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 TEX13CA0A0J9YWL9 993 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 GXYLT2A0PJZ3 443 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 PMS2P1A4D2B8 440 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 F5H0A9 414 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 PSMD9O00233 223 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 ASAP2O43150 1006 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 SUV39H1O43463 412 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 TACC1O75410 805 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 SPDEFO95238 335 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 SMC2O95347 1197 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 FGBP02675 491 aa3.88□□□□□ -1.79
APAF1-208ENST00000549007 MBPP02686 304 aaPredicted RBP3.88□□□□□ -1.79
APAF1-208ENST00000549007 CXCL10P02778 98 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms