RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SLC10A2Q12908 348 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 SRSF6Q13247 344 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 LY6DQ14210 128 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 CLPPQ16740 277 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 ASTE1Q2TB18 679 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 AMZ1Q400G9 498 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 PYCR3Q53H96 274 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 PIM3Q86V86 326 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 NLRP8Q86W28 1048 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 LPCAT1Q8NF37 534 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 RIOK2Q9BVS4 552 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 XPO4Q9C0E2 1151 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 HAUS2Q9NVX0 235 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 PCYT1BQ9Y5K3 369 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-205ENST00000548650 PPM1DO15297 605 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 INPP4BO15327 924 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 PYGLP06737 847 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 MMP2P08253 660 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 H2AFZP0C0S5 128 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 MX2P20592 715 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 CA4P22748 312 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 CD1CP29017 333 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 ALDH4A1P30038 563 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 GPR3P46089 330 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 MAPK10P53779 464 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 RPL26P61254 145 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 PEX6Q13608 980 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 ZNF574Q6ZN55 896 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 H2AFVQ71UI9 128 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 MARK2Q7KZI7 788 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 MAP7D3Q8IWC1 876 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 RAVER1Q8IY67 606 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 NRSN1Q8IZ57 195 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 USP7Q93009 1102 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 CCDC74BQ96LY2 380 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 WDR24Q96S15 920 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 DNAJC7Q99615 494 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 PCDH9Q9HC56 1237 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 LCMT1Q9UIC8 334 aa17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 RPL26L1Q9UNX3 145 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHMP1A-205ENST00000548650 IGHV5-10-1A0A0J9YXX1 117 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 HGSO14964 777 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 CLDN7O95471 211 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 PPIDQ08752 370 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 ZBTB17Q13105 803 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 LRP8Q14114 963 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 HENMT1Q5T8I9 393 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 USP53Q70EK8 1073 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 ZFAND4Q86XD8 727 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 DTX1Q86Y01 620 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 GALNT13Q8IUC8 556 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 CCDC13Q8IYE1 715 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 PLD5Q8N7P1 536 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 RCBTB1Q8NDN9 531 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 EXD1Q8NHP7 514 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 RAPGEF5Q92565 580 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 VPS18Q9P253 973 aa17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 OAS3Q9Y6K5 1087 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-205ENST00000548650 IGHV1OR21-1A0A087WYE8 117 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 C1orf232A0A0U1RR37 186 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 FADS2P1A8MWK0 482 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 KCNK1O00180 336 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 DNAJC6O75061 913 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 EML2O95834 649 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 TMEM253P0C7T8 217 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 THRAP10827 490 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 CCL4P13236 92 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 CD86P42081 329 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 FASLGP48023 281 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 IFI35P80217 286 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 BIRC2Q13490 618 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 QPCTQ16769 361 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 NKAIN2Q5VXU1 208 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 ZNF605Q86T29 641 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 VASH2Q86V25 355 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 SFRP1Q8N474 314 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 CNTD1Q8N815 330 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 SLC37A2Q8TED4 501 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 PMEPA1Q969W9 287 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 RNF157Q96PX1 679 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 B3GNT4Q9C0J1 378 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 WDR70Q9NW82 654 aa17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 CNOT6Q9ULM6 557 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-205ENST00000548650 TENM4Q6N022 2769 aa17.27■□□□□ 0.35
CHMP1A-205ENST00000548650 SSU72P8A0A1W2PR75 194 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 LRRD1A4D1F6 860 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 C3orf70A6NLC5 250 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNF487B1APH4 448 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 ZW10O43264 779 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 ATP1A1P05023 1023 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 KDELR1P24390 212 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 CD82P27701 267 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 SPINT3P49223 89 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 ARSDP51689 593 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 LIMK2P53671 638 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 SQSTM1Q13501 440 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 SLC9A4Q6AI14 798 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms