RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 AP2M1Q96CW1 435 aa15.13■□□□□ 0.01
SNX29P1-201ENST00000548357 COX14Q96I36 57 aa15.13■□□□□ 0.01
SNX29P1-201ENST00000548357 CMKLR1Q99788 373 aa15.13■□□□□ 0.01
SNX29P1-201ENST00000548357 RIOK2Q9BVS4 552 aaKnown RBP15.13■□□□□ 0.01
SNX29P1-201ENST00000548357 TDRD1Q9BXT4 1180 aaKnown RBP15.13■□□□□ 0.01
SNX29P1-201ENST00000548357 BRD8Q9H0E9 1235 aa15.13■□□□□ 0.01
SNX29P1-201ENST00000548357 CNOT6Q9ULM6 557 aaKnown RBP15.13■□□□□ 0.01
SNX29P1-201ENST00000548357 RELNP78509 3460 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 A0A1W2PQ67 120 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 SMTNL1A8MU46 457 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 FADS2P1A8MWK0 482 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 DNAJC6O75061 913 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 ATP1A1P05023 1023 aaKnown RBP15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 MMP2P08253 660 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 THRAP10827 490 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 SERPINB6P35237 376 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 LIMK2P53671 638 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 GBE1Q04446 702 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 PAFAH1B3Q15102 231 aaKnown RBP15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 FIGNQ5HY92 759 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 ALG1LQ6GMV1 187 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 PRICKLE2Q7Z3G6 844 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 PQLC3Q8N755 202 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 TMEM159Q96B96 161 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 RNF31Q96EP0 1072 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 PACSIN1Q9BY11 444 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 NAT10Q9H0A0 1025 aaKnown RBP15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 CBX8Q9HC52 389 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 ARFGAP3Q9NP61 516 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 IP6K2Q9UHH9 426 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 TTLL3Q9Y4R7 772 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 B3GALT1Q9Y5Z6 326 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 MAST4O15021 2626 aa15.12■□□□□ 0.01
SNX29P1-201ENST00000548357 NBASA2RRP1 2371 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 CAPN8A6NHC0 703 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 GOLGA6L22H0YM25 854 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 SERPINC1P01008 464 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 SSR1P43307 286 aaKnown RBP15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 FANCCQ00597 558 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 ANKRD20A8PQ5CZ79 823 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 RALGPS1Q5JS13 557 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 ZNF648Q5T619 568 aaPredicted RBP15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 BBS5Q8N3I7 341 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 LPCAT1Q8NF37 534 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 ART4Q93070 314 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 NKD1Q969G9 470 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 EID2BQ96D98 161 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 POLR1EQ9GZS1 481 aaKnown RBP15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 CDH19Q9H159 772 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 RBM22Q9NW64 420 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 DTLQ9NZJ0 730 aa15.11■□□□□ 0.01
SNX29P1-201ENST00000548357 A0A1W2PQJ5 194 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 MATN3O15232 486 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 GYPCP04921 128 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 SERPING1P05155 500 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 LIFP15018 202 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 ZBTB17Q13105 803 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 ZNF765Q7L2R6 523 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 BMPERQ8N8U9 685 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 OR4D9Q8NGE8 314 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 ZNF564Q8TBZ8 553 aaPredicted RBP15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 NSMCE1Q8WV22 266 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 SLC12A9Q9BXP2 914 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 CEP41Q9BYV8 373 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 STARD5Q9NSY2 213 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 KCNK4Q9NYG8 393 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 RCOR3Q9P2K3 495 aaPredicted RBP15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 TBC1D29Q9UFV1 150 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 KCNK6Q9Y257 313 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 NAV2Q8IVL1 2488 aa15.1■□□□□ 0.01
SNX29P1-201ENST00000548357 TNRC6AQ8NDV7 1962 aaKnown RBP15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 A6NCN8 305 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 EFCAB7A8K855 629 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 A8MU76 341 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 HGSO14964 777 aaPredicted RBP15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 UGT1A3P35503 534 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 GPR3P46089 330 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 EPHB1P54762 984 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 QPCTQ16769 361 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 CCDC122Q5T0U0 273 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 ANKS6Q68DC2 871 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 ALKBH5Q6P6C2 394 aaKnown RBP15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 B4GALNT4Q76KP1 1039 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 GALNT13Q8IUC8 556 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 SFRP1Q8N474 314 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 RAPGEF5Q92565 580 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 FAF2Q96CS3 445 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 TAAR9Q96RI9 348 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 CTRCQ99895 268 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 PCDH9Q9HC56 1237 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 KCTD5Q9NXV2 234 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 SEPT10Q9P0V9 454 aa15.09■□□□□ 0.01
SNX29P1-201ENST00000548357 SYCE3A1L190 88 aa15.08■□□□□ 0
SNX29P1-201ENST00000548357 STMND1H3BQB6 276 aa15.08■□□□□ 0
SNX29P1-201ENST00000548357 ASMTLO95671 621 aa15.08■□□□□ 0
SNX29P1-201ENST00000548357 ITGB2P05107 769 aa15.08■□□□□ 0
SNX29P1-201ENST00000548357 ACP5P13686 325 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms