RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 FAM114A2Q9NRY5 505 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 DKK3Q9UBP4 350 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 PHTF1Q9UMS5 762 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 RPL26L1Q9UNX3 145 aaKnown RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 SHOC2Q9UQ13 582 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 V9GYY5 206 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 SCN8AQ9UQD0 1980 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 LOC285095A0A1B0GVY8 99 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 SMAPO00193 183 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 EPOP01588 193 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 PRKCGP05129 697 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 ADRB3P13945 408 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 CTPS1P17812 591 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 ACP1P24666 158 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 ADRA1AP35348 466 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 DRD3P35462 400 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 SEMG2Q02383 582 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 CAV1Q03135 178 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 CDH17Q12864 832 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 TARDBPQ13148 414 aaKnown RBP eCLIP12.07□□□□□ -0.48
HDAC7-226ENST00000547259 QPCTQ16769 361 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 LRRK1Q38SD2 2015 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 LRRC73Q5JTD7 316 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 SIRPB2Q5JXA9 342 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 HES3Q5TGS1 186 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 HIBCHQ6NVY1 386 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-226ENST00000547259 ERAP2Q6P179 960 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 USP45Q70EL2 814 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 TRIM69Q86WT6 500 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 IFT20Q8IY31 132 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 OR52K1Q8NGK4 314 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
HDAC7-226ENST00000547259 PIH1D2Q8WWB5 315 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 FGF11Q92914 225 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 FAM131CQ96AQ9 280 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 KLHDC7BQ96G42 594 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 HDAC8Q9BY41 377 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 EBF2Q9HAK2 575 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 PIH1D1Q9NWS0 290 aaKnown RBP12.07□□□□□ -0.48
HDAC7-226ENST00000547259 GRHL1Q9NZI5 618 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 CLCA2Q9UQC9 943 aa12.07□□□□□ -0.48
HDAC7-226ENST00000547259 TRPM6Q9BX84 2022 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
HDAC7-226ENST00000547259 COL6A6A6NMZ7 2263 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 A0A0J9YYE9 177 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 ANKRD66B4E2M5 251 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 AP3B1O00203 1094 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 PLRG1O43660 514 aaKnown RBP12.06□□□□□ -0.48
HDAC7-226ENST00000547259 PRLP01236 227 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 TRBC1P01850 177 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 ALPIP09923 528 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 ALPPL2P10696 532 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 CYP2A6P11509 494 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-226ENST00000547259 TIMP2P16035 220 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 GRIA1P42261 906 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 ABL2P42684 1182 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 SUOXP51687 545 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 DRG2P55039 364 aaKnown RBP12.06□□□□□ -0.48
HDAC7-226ENST00000547259 PLTPP55058 493 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 DNAJC3Q13217 504 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 HLTFQ14527 1009 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC7-226ENST00000547259 SHBQ15464 509 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 TRADDQ15628 312 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 UGP2Q16851 508 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 PRAMEF14Q5SWL7 426 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 LRRC8BQ6P9F7 803 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 RANBP10Q6VN20 620 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 TTC7BQ86TV6 843 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 MARCH9Q86YJ5 346 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 DCP2Q8IU60 420 aaKnown RBP12.06□□□□□ -0.48
HDAC7-226ENST00000547259 LSMEM2Q8N112 164 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 MCUQ8NE86 351 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 IFT81Q8WYA0 676 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 SEC14L1Q92503 715 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 RAB7BQ96AH8 199 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 SERPINB12Q96P63 405 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 XAB2Q9HCS7 855 aaKnown RBP12.06□□□□□ -0.48
HDAC7-226ENST00000547259 PCDH12Q9NPG4 1184 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 CASS4Q9NQ75 786 aa12.06□□□□□ -0.48
HDAC7-226ENST00000547259 TEX51A0A1B0GUA7 166 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 NEMP2A6NFY4 417 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 BHMG1C9JSJ3 638 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-226ENST00000547259 NEMP1O14524 444 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 ATXN7O15265 892 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-226ENST00000547259 SLC4A1P02730 911 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 PIRTP0C851 137 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 MLNP12872 115 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 TPH1P17752 444 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 SESN2P58004 480 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-226ENST00000547259 DAB2P98082 770 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 ELP6Q0PNE2 266 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 BNIP3Q12983 259 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 MTM1Q13496 603 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 CUL1Q13616 776 aa12.05□□□□□ -0.48
HDAC7-226ENST00000547259 SEPT6Q14141 434 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms