RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 GRIK2Q13002 908 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 EFNB3Q15768 340 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 XKR9Q5GH70 373 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 DCST1Q5T197 706 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 MFSD4BQ5TF39 518 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 JADE1Q6IE81 842 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 RGMBQ6NW40 437 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 DUS1LQ6P1R4 473 aaKnown RBP6.13□□□□□ -1.43
NPAS3-204ENST00000546849 C9orf47Q6ZRZ4 202 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 SDCCAG8Q86SQ7 713 aaPredicted RBP6.13□□□□□ -1.43
NPAS3-204ENST00000546849 SIL1Q9H173 461 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 SETD4Q9NVD3 440 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 WNT16Q9UBV4 365 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 CHORDC1Q9UHD1 332 aaPredicted RBP6.13□□□□□ -1.43
NPAS3-204ENST00000546849 SNX8Q9Y5X2 465 aa6.13□□□□□ -1.43
NPAS3-204ENST00000546849 AGAP14A8MT82 685 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 LACTBL1A8MY62 500 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 CTDSP2O14595 271 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 SPINT2O43291 252 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 NDUFS7O75251 213 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 GAGE7O76087 117 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 GAGE12FP0CL80 117 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 GAGE12GP0CL81 117 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 GAGE12IP0CL82 117 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 SNHG28P0DPA3 235 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 LMO1P25800 156 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 SLC15A1P46059 708 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 CLCNKAP51800 687 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
NPAS3-204ENST00000546849 ECT2LQ008S8 904 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 CDC16Q13042 620 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 GAGE1Q13065 139 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 GAGE4Q13068 117 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 RAB41Q5JT25 222 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 LRIF1Q5T3J3 769 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 CCNI2Q6ZMN8 369 aaPredicted RBP6.12□□□□□ -1.43
NPAS3-204ENST00000546849 CCDC190Q86UF4 302 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 EPHX4Q8IUS5 362 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 ARID3BQ8IVW6 561 aaPredicted RBP6.12□□□□□ -1.43
NPAS3-204ENST00000546849 ADHFE1Q8IWW8 467 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 PELI3Q8N2H9 469 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 TMED6Q8WW62 240 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 MIB2Q96AX9 1013 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 RSRC1Q96IZ7 334 aaKnown RBP6.12□□□□□ -1.43
NPAS3-204ENST00000546849 PIGMQ9H3S5 423 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 NOX4Q9NPH5 578 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 UBA2Q9UBT2 640 aaPredicted RBP6.12□□□□□ -1.43
NPAS3-204ENST00000546849 RPS6KA6Q9UK32 745 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 CMAHPQ9Y471 501 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 CLIC4Q9Y696 253 aa6.12□□□□□ -1.43
NPAS3-204ENST00000546849 SPATA31D1Q6ZQQ2 1576 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 NCAPD3P42695 1498 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 A0A0U1RQJ8 604 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 LRRC72A6NJI9 287 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 EIF4E1BA6NMX2 242 aaKnown RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 INO80B-WBP1J3KQ70 363 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 M0QZ24 198 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 PLRG1O43660 514 aaKnown RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 OR2C1O95371 312 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 ACAA1P09110 424 aaPredicted RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 PON1P27169 355 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 HOXA13P31271 388 aaPredicted RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 EIF2DP41214 584 aaKnown RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 LMAN1P49257 510 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 CALD1Q05682 793 aaKnown RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 GRSF1Q12849 480 aaKnown RBP eCLIP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 STK4Q13043 487 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 HNRNPA0Q13151 305 aaKnown RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 DHX34Q14147 1143 aaKnown RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 ZNF805Q5CZA5 627 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 FRG2Q64ET8 278 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 FAM122CQ6P4D5 195 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 MAGEC3Q8TD91 643 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 ELP5Q8TE02 316 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 DNAAF4Q8WXU2 420 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 RND1Q92730 232 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 GAD1Q99259 594 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 MXD3Q9BW11 206 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 TEX12Q9BXU0 123 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 HRH4Q9H3N8 390 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 SUCLA2Q9P2R7 463 aaPredicted RBP6.11□□□□□ -1.43
NPAS3-204ENST00000546849 COPG2Q9UBF2 871 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 LOXL2Q9Y4K0 774 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 NFS1Q9Y697 457 aa6.11□□□□□ -1.43
NPAS3-204ENST00000546849 GOLGA6L9A6NEM1 432 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 CDRT15L2A8MXV6 281 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 MAP2K7O14733 419 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 IGHV4-30-4P0DP06 118 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 MATR3P43243 847 aaKnown RBP eCLIP6.1□□□□□ -1.43
NPAS3-204ENST00000546849 NUCB1Q02818 461 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 IRF3Q14653 427 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 NTRK2Q16620 822 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 SOWAHCQ53LP3 525 aaPredicted RBP6.1□□□□□ -1.43
NPAS3-204ENST00000546849 KCNT1Q5JUK3 1230 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 CREB3L2Q70SY1 520 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 ENOSF1Q7L5Y1 443 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 GPR180Q86V85 440 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 IQCF1Q8N6M8 205 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 POC5Q8NA72 575 aa6.1□□□□□ -1.43
NPAS3-204ENST00000546849 OR1J2Q8NGS2 313 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms