RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 GGA3Q9NZ52 723 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PADI3Q9ULW8 664 aa3.96□□□□□ -1.78
CCDC38-204ENST00000546816 PMS2P5A8MQ11 134 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 SEC31AO94979 1220 aaKnown RBP3.95□□□□□ -1.78
CCDC38-204ENST00000546816 POLBP06746 335 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 PRSS1P07477 247 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 HOXB5P09067 269 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 HNRNPA1P09651 372 aaKnown RBP eCLIP3.95□□□□□ -1.78
CCDC38-204ENST00000546816 HSD3B1P14060 373 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 RPP30P78346 268 aaKnown RBP3.95□□□□□ -1.78
CCDC38-204ENST00000546816 GALNT2Q10471 571 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 ZNF234Q14588 700 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 ALG11Q2TAA5 492 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 SLC46A3Q7Z3Q1 461 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 NRROSQ86YC3 692 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 ZNF524Q96C55 264 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 ORAI1Q96D31 301 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 LITAFQ99732 161 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 POLR3CQ9BUI4 534 aaPredicted RBP3.95□□□□□ -1.78
CCDC38-204ENST00000546816 BARHL1Q9BZE3 327 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 SEBOXQ9HB31 216 aaPredicted RBP3.95□□□□□ -1.78
CCDC38-204ENST00000546816 MPP6Q9NZW5 540 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 UTYO14607 1347 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 PTPRCP08575 1304 aa3.95□□□□□ -1.78
CCDC38-204ENST00000546816 USP17L23D6RBM5 183 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 DVL1O14640 695 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 DCTP40126 519 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 MMP14P50281 582 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 DVL1P1P54792 670 aaPredicted RBP3.94□□□□□ -1.78
CCDC38-204ENST00000546816 EEF1A1P68104 462 aaKnown RBP3.94□□□□□ -1.78
CCDC38-204ENST00000546816 CSNK2A1P68400 391 aaPredicted RBP3.94□□□□□ -1.78
CCDC38-204ENST00000546816 FGFBP1Q14512 234 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 TAF12Q16514 161 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 BAK1Q16611 211 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 COL28A1Q2UY09 1125 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 SIRPB2Q5JXA9 342 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 EEF1A1P5Q5VTE0 462 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 FRG2Q64ET8 278 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 CSNK2A3Q8NEV1 391 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 KLHL29Q96CT2 875 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 IFIH1Q9BYX4 1025 aaKnown RBP3.94□□□□□ -1.78
CCDC38-204ENST00000546816 BRF2Q9HAW0 419 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 KCND2Q9NZV8 630 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.94□□□□□ -1.78
CCDC38-204ENST00000546816 TBX20Q9UMR3 447 aa3.94□□□□□ -1.78
CCDC38-204ENST00000546816 FAF1Q9UNN5 650 aaPredicted RBP3.94□□□□□ -1.78
CCDC38-204ENST00000546816 SNAP23O00161 211 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 VCYO14598 125 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 ZNHIT1O43257 154 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 EGFP01133 1207 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 ALDH4A1P30038 563 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 CDAP32320 146 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 FASLGP48023 281 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 HOXA1P49639 335 aaPredicted RBP3.93□□□□□ -1.78
CCDC38-204ENST00000546816 VAMP2P63027 116 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
CCDC38-204ENST00000546816 RUNX1T1Q06455 604 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 FOXM1Q08050 763 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 GPR68Q15743 365 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 USP41Q3LFD5 358 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 C6orf141Q5SZD1 244 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 CCNYL2Q5T2Q4 361 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 ARHGAP11AQ6P4F7 1023 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 FAM171BQ6P995 826 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 RAD9BQ6WBX8 426 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 ACVR1CQ8NER5 493 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 HVCN1Q96D96 273 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 LGALS12Q96DT0 336 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 QRFPRQ96P65 431 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.93□□□□□ -1.78
CCDC38-204ENST00000546816 DGKBQ9Y6T7 804 aa3.93□□□□□ -1.78
CCDC38-204ENST00000546816 SPINT2O43291 252 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 TUBBP07437 444 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 PATE4P0C8F1 98 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 CPOXP36551 454 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 TAS2R38P59533 333 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 TUBB4BP68371 445 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 FOXD4Q12950 439 aaPredicted RBP3.92□□□□□ -1.78
CCDC38-204ENST00000546816 PTP4A2Q12974 167 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 GAGE5Q13069 117 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 GAGE6Q13070 117 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 TRPC3Q13507 836 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 SLC1A5Q15758 541 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 DECR1Q16698 335 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 SIGIRRQ6IA17 410 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 ZNF497Q6ZNH5 498 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 CADM4Q8NFZ8 388 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 OR10V1Q8NGI7 309 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 KIF1BPQ96EK5 621 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 ST6GAL2Q96JF0 529 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 C17orf77Q96MU5 243 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 SLC6A13Q9NSD5 602 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 ACSS1Q9NUB1 689 aaPredicted RBP3.92□□□□□ -1.78
CCDC38-204ENST00000546816 FAM118AQ9NWS6 357 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 SARDHQ9UL12 918 aa3.92□□□□□ -1.78
CCDC38-204ENST00000546816 ZCWPW2A0A1B0GU75 182 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 TSPAN4O14817 238 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 HOXC11O43248 304 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms