RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 P2RY2P41231 377 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 KCNJ1P48048 391 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 TAGLNQ01995 201 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 SEPT6Q14141 434 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 SLBPQ14493 270 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 IHHQ14623 411 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 WHAMMP3Q1A5X7 153 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 TSNAXIP1Q2TAA8 658 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 USP39Q53GS9 565 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ANKRD20A2Q5SQ80 823 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ARMC12Q5T9G4 340 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 FAXCQ5TGI0 409 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ANKRD20A1Q5TYW2 823 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ANKRD20A3Q5VUR7 823 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 FBXL19Q6PCT2 694 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ZC3H14Q6PJT7 736 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 CCDC137Q6PK04 289 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 GSTA5Q7RTV2 222 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PID1Q7Z2X4 250 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PRPF39Q86UA1 669 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 FAM124AQ86V42 546 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ZSWIM9Q86XI8 627 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 HDDC3Q8N4P3 179 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 GLIS1Q8NBF1 620 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ZBTB44Q8NCP5 570 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PHC3Q8NDX5 983 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 IPMKQ8NFU5 416 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 SPATA22Q8NHS9 363 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 KIF18AQ8NI77 898 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 GRK7Q8WTQ7 553 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PDCD6IPQ8WUM4 868 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 GAB3Q8WWW8 586 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 RLN3Q8WXF3 142 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 TADA1Q96BN2 335 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 TOE1Q96GM8 510 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 OXNAD1Q96HP4 312 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 NSMCE3Q96MG7 304 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PPP1R2P1Q96PQ5 205 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 FCRL5Q96RD9 977 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 OMDQ99983 421 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 FSD1LQ9BXM9 530 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 HDAC8Q9BY41 377 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 DDX47Q9H0S4 455 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 VPS45Q9NRW7 570 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ZSCAN32Q9NX65 697 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PAK5Q9P286 719 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 FAM153AQ9UHL3 310 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 CDC23Q9UJX2 597 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ITM2BQ9Y287 266 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 RAI2Q9Y5P3 530 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 MRFAP1Q9Y605 127 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 A0A1W2PQ67 120 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 GOLGA6CA6NDK9 693 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 GOLGA6BA6NDN3 693 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 CAPN8A6NHC0 703 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 LRRC72A6NJI9 287 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 H0Y858 1186 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 AREL1O15033 823 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF500O60304 480 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PMPCBO75439 489 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ANXA9O76027 345 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 SEMA4FO95754 770 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ZSCAN5DPP0CG00 497 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 GOLGA6DP0CG33 693 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 BCKDHBP21953 392 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 XPAP23025 273 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 NFKBIAP25963 317 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 OXTRP30559 389 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 STIP1P31948 543 aaKnown RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ACSL1P33121 698 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 TNNT3P45378 269 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 VPS41P49754 854 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 SUOXP51687 545 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 EPHB1P54762 984 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 GEMP55040 296 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 WNT3AP56704 352 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 TAS2R38P59533 333 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 RPL26P61254 145 aaKnown RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PPP2CBP62714 309 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PPP2CAP67775 309 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 RPL6Q02878 288 aaKnown RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 LMNB2Q03252 620 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 C2orf54Q08AI8 447 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 CCDC15Q0P6D6 951 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ELP6Q0PNE2 266 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 TCF15Q12870 199 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 SRSF5Q13243 272 aaKnown RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 MPP3Q13368 585 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 GALNT3Q14435 633 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PRPSAP1Q14558 356 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 UGP2Q16851 508 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ERAP2Q6P179 960 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 KDELC1Q6UW63 502 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 USP45Q70EL2 814 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF572Q7Z3I7 529 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-211ENST00000546304 PRUNE1Q86TP1 453 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 C11orf74Q86VG3 221 aa6.35□□□□□ -1.39
PRKDC-211ENST00000546304 HID1Q8IV36 788 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms