RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ZDHHC20Q5W0Z9 365 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 LRRC8BQ6P9F7 803 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 PARGQ86W56 976 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 NAT8LQ8N9F0 302 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 OR4K2Q8NGD2 314 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 ZSCAN5AQ9BUG6 496 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 SPATA16Q9BXB7 569 aa20.37■□□□□ 0.85
HMGA2-211ENST00000545998 PHPT1Q9NRX4 125 aaPredicted RBP20.37■□□□□ 0.85
HMGA2-211ENST00000545998 CNOT6Q9ULM6 557 aaKnown RBP20.37■□□□□ 0.85
HMGA2-211ENST00000545998 PNMA8BQ9ULN7 279 aaPredicted RBP20.37■□□□□ 0.85
HMGA2-211ENST00000545998 SPTBN4Q9H254 2564 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 A0A1B0GTQ1 180 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.36■□□□□ 0.85
HMGA2-211ENST00000545998 MROH6A6NGR9 719 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 FADS2P1A8MWK0 482 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 AP3B1O00203 1094 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 ZNF883P0CG24 379 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 MYCLP1P12525 358 aaPredicted RBP20.36■□□□□ 0.85
HMGA2-211ENST00000545998 SPAM1P38567 509 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 RXRGP48443 463 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 LIMK1P53667 647 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 SEPT6Q14141 434 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 RNASEH2BQ5TBB1 312 aaKnown RBP20.36■□□□□ 0.85
HMGA2-211ENST00000545998 STPG1Q5TH74 334 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 PPIL6Q8IXY8 311 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 TRAM1L1Q8N609 369 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 MCUQ8NE86 351 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 OR13C4Q8NGS5 318 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 DTX3LQ8TDB6 740 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 WDR92Q96MX6 357 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 RANBP9Q96S59 729 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 TRIM51Q9BSJ1 452 aa20.36■□□□□ 0.85
HMGA2-211ENST00000545998 PLXNB3Q9ULL4 1909 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 TMEM202A6NGA9 273 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 C4orf47A7E2U8 309 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 GAPDHSO14556 408 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-211ENST00000545998 DNALI1O14645 258 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-211ENST00000545998 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-211ENST00000545998 SARNPP82979 210 aaKnown RBP20.35■□□□□ 0.85
HMGA2-211ENST00000545998 ARHGAP8P85298 464 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 CCDC38Q502W7 563 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 PDPK2PQ6A1A2 396 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 COX14Q96I36 57 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 HIC2Q96JB3 615 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 KLF15Q9UIH9 416 aa20.35■□□□□ 0.85
HMGA2-211ENST00000545998 ARID1BQ8NFD5 2236 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-211ENST00000545998 RAD51CO43502 376 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 CSF2P04141 144 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 ADRA1DP25100 572 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 PSMA3P25788 255 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 ARRB1P49407 418 aaPredicted RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 SESN2P58004 480 aaPredicted RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 ZNF542PQ5EBM4 170 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 ENPP7Q6UWV6 458 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 FAM151BQ6UXP7 276 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 MAATS1Q7Z4T9 603 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 CAND1Q86VP6 1230 aaKnown RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 OR56A4Q8NGH8 313 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 STYXQ8WUJ0 223 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 DNAJC1Q96KC8 554 aaKnown RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 CAAP1Q9H8G2 361 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 DNAJC28Q9NX36 388 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 FKBPLQ9UIM3 349 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 GLYATL1P3A0A0U1RQE8 302 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 HEATR9A2RTY3 570 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 FAM187AA6NFU0 413 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 INPP4BO15327 924 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 YKT6O15498 198 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 NME1P15531 152 aaKnown RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 KELP23276 732 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 HADHAP40939 763 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 NPY2RP49146 381 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 CCT8P50990 548 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 MRPS25P82663 173 aaKnown RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 IL9RQ01113 521 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 LAMB3Q13751 1172 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 CHRNA6Q15825 494 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 KCTD16Q68DU8 428 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 PCGF5Q86SE9 256 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 NETO1Q8TDF5 533 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 FRMD8Q9BZ67 464 aaPredicted RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 IL22Q9GZX6 179 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 TM7SF3Q9NS93 570 aa20.34■□□□□ 0.85
HMGA2-211ENST00000545998 NLE1Q9NVX2 485 aaPredicted RBP20.34■□□□□ 0.85
HMGA2-211ENST00000545998 TNFRSF10CO14798 259 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 CEACAM5P06731 702 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 MLNP12872 115 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 TMPRSS15P98073 1019 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 XIAPP98170 497 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 SLC14A1Q13336 389 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 ALG11Q2TAA5 492 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 ATP13A5Q4VNC0 1218 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 IZUMO3Q5VZ72 239 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 TRIM74Q86UV6 250 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 TSACCQ96A04 125 aaPredicted RBP20.33■□□□□ 0.84
HMGA2-211ENST00000545998 SERPINB12Q96P63 405 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 VPS35Q96QK1 796 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 XAB2Q9HCS7 855 aaKnown RBP20.33■□□□□ 0.84
HMGA2-211ENST00000545998 FGF22Q9HCT0 170 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 BFARQ9NZS9 450 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms