RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 BAIAP3O94812 1187 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SORBS2O94875 1100 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 LRIG2O94898 1065 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 HPRP00739 348 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 EPOP01588 193 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 IGLV3-25P01717 112 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PGK2P07205 417 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 MMP3P08254 477 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PDGFRBP09619 1106 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ATP6V1B1P15313 513 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 LBPP18428 481 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 OGNP20774 298 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 CD9P21926 228 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 LMO2P25791 158 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 GABRB3P28472 473 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 DPP6P42658 865 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SLC1A2P43004 574 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 RENBPP51606 427 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PSMD7P51665 324 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SUOXP51687 545 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 NDST2P52849 883 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 CRYBB1P53674 252 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TMBIM6P55061 237 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TAS2R39P59534 338 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 HERVK_113P63132 956 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 CDKL1Q00532 357 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PRKCQQ04759 706 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SPEM2Q0P670 501 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 MERTKQ12866 999 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 NME3Q13232 169 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TOP3AQ13472 1001 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 EIF4EBP2Q13542 120 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 DLG2Q15700 870 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ATP6AP1Q15904 470 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 FXNQ16595 210 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 FSCN1Q16658 493 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF829Q3KNS6 432 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PLA2G4EQ3MJ16 856 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SLC36A3Q495N2 470 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 C6orf10Q5SRN2 563 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TSTD2Q5T7W7 516 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 MANEALQ5VSG8 457 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 DENND5AQ6IQ26 1287 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TTC33Q6PID6 262 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TXNDC11Q6PKC3 985 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 CES3Q6UWW8 571 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 Q6ZNX1 250 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PAQR9Q6ZVX9 377 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 FRA10AC1Q70Z53 315 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 AMIGO2Q86SJ2 522 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 FAM35AQ86V20 835 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 GPR180Q86V85 440 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SLC41A1Q8IVJ1 513 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 RNF168Q8IYW5 571 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 GALNT4Q8N4A0 578 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SMYD1Q8NB12 490 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 MINDY2Q8NBR6 621 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 HEXDCQ8WVB3 486 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PPWD1Q96BP3 646 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 C19orf60Q96EN9 201 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 MYRFLQ96LU7 910 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 NPAS2Q99743 824 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 OMDQ99983 421 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SPOCK3Q9BQ16 436 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 BDH2Q9BUT1 245 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 C1orf50Q9BV19 199 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 C1QTNF3Q9BXJ4 246 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 FSD1LQ9BXM9 530 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ERVK-6Q9BXR3 956 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TDRD1Q9BXT4 1180 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 LRRC3Q9BY71 257 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ULBP1Q9BZM6 244 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ABHD16BQ9H3Z7 469 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 TFB2MQ9H5Q4 396 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 CAB39LQ9H9S4 337 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 PREBQ9HCU5 417 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ATP13A1Q9HD20 1204 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 CHST12Q9NRB3 414 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SDR39U1Q9NRG7 319 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 INTS10Q9NVR2 710 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 IRAK4Q9NWZ3 460 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 MARK1Q9P0L2 795 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 GMIPQ9P107 970 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF639Q9UID6 485 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 APPL1Q9UKG1 709 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 CNOT6Q9ULM6 557 aaKnown RBP6.46□□□□□ -1.38
SNHG1-225ENST00000545920 VWA7Q9Y334 891 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 MFHAS1Q9Y4C4 1052 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 SNX13Q9Y5W8 968 aa6.46□□□□□ -1.38
SNHG1-225ENST00000545920 A0A1B0GVG6 124 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CCDC162PA2VCL2 907 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PRORSD1PA6NEY8 169 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SYCE1LA8MT33 242 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 H3BSA7 217 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 STX16-NPEPL1H3BU86 382 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 FBP2O00757 339 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 STX16O14662 325 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PPEF2O14830 753 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 KHNYNO15037 678 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PFDN6O15212 129 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms