RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 C1orf50Q9BV19 199 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 NUSAP1Q9BXS6 441 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 SIK2Q9H0K1 926 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 ATXN3LQ9H3M9 355 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 TFB2MQ9H5Q4 396 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 IFT80Q9P2H3 777 aaPredicted RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 TDRKHQ9Y2W6 561 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 OAS3Q9Y6K5 1087 aaKnown RBP8.73□□□□□ -1.01
TDP1-204ENST00000545686 TRPM7Q96QT4 1865 aa8.73□□□□□ -1.01
TDP1-204ENST00000545686 CHD5Q8TDI0 1954 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 SOBPA7XYQ1 873 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 COQ9O75208 318 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 TULP3O75386 442 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 SEC14L2O76054 403 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 MBL2P11226 248 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 HGFP14210 728 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ZNF37AP17032 561 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 UGT1A1P22309 533 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 UGT1A4P22310 534 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 UGT1A3P35503 534 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 UGT1A5P35504 534 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 CRYBB1P53674 252 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 ADAM17P78536 824 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 KCNC4Q03721 635 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 LIPEQ05469 1076 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 NFATC3Q12968 1075 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 NFYCQ13952 458 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 CAPRIN1Q14444 709 aaKnown RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 PCSK7Q16549 785 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ANKDD1AQ495B1 522 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 FGD3Q5JSP0 725 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 IQSEC1Q6DN90 963 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ANKRD26P1Q6NSI1 321 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 OFCC1Q8IZS5 231 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ZC3H15Q8WU90 426 aaKnown RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 RAB2BQ8WUD1 216 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ACDQ96AP0 544 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 DCPSQ96C86 337 aaKnown RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 RDH12Q96NR8 316 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 BRINP2Q9C0B6 783 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 GPN2Q9H9Y4 310 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 MAGEE1Q9HCI5 957 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 PFDN4Q9NQP4 134 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 AIG1Q9NVV5 245 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 SEPT3Q9UH03 358 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 LEF1Q9UJU2 399 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 TMEM221A6NGB7 291 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 PEX11BO96011 259 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 HPRP00739 348 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ALBP02768 609 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ENO2P09104 434 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 OCM2P0CE71 109 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 OCMP0CE72 109 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 TSPAN8P19075 237 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 CDH13P55290 713 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 TGFBIQ15582 683 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 RBM48Q5RL73 367 aaKnown RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 BROXQ5VW32 411 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 FAM171BQ6P995 826 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 C16orf87Q6PH81 154 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 FKBP9P1Q75LS8 142 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 SFRP1Q8N474 314 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 OR6P1Q8NGX9 317 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 BPIFB1Q8TDL5 484 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 DNAJB3Q8WWF6 145 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 FCRL2Q96LA5 508 aaPredicted RBP8.72□□□□□ -1.01
TDP1-204ENST00000545686 ATOH8Q96SQ7 321 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 SLC30A3Q99726 388 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ABHD16BQ9H3Z7 469 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 TUBB1Q9H4B7 451 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ABCC13Q9NSE7 274 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 MAGEL2Q9UJ55 1249 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 DSEQ9UL01 958 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 COQ6Q9Y2Z9 468 aa8.72□□□□□ -1.01
TDP1-204ENST00000545686 ADM5C9JUS6 153 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 E9PAM4 449 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 BOLA2-SMG1P6H3BVE0 249 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 KERAO60938 352 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 PRSS23O95084 383 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 ZBTB11O95625 1053 aaPredicted RBP8.71□□□□□ -1.01
TDP1-204ENST00000545686 SNAP29O95721 258 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 CYBBP04839 570 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 SLC2A3P11169 496 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 CDH1P12830 882 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 MTHFD2P13995 350 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 OGNP20774 298 aaKnown RBP8.71□□□□□ -1.01
TDP1-204ENST00000545686 MAP4P27816 1152 aaKnown RBP8.71□□□□□ -1.01
TDP1-204ENST00000545686 RELAQ04206 551 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 XKR7Q5GH72 579 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 NOMO2Q5JPE7 1267 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.01
TDP1-204ENST00000545686 MRNIPQ6NTE8 343 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 NIPAL1Q6NVV3 410 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 ANKRD23Q86SG2 305 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 PIM3Q86V86 326 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 UMODL1-AS1Q8N2C9 162 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 TMEM199Q8N511 208 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 MAGEE2Q8TD90 523 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms