RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	SMAD7	O15105	426 aa	Known RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	AKR1B10	O60218	316 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	SOCS5	O75159	536 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	RFPL3	O75679	317 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	PROSC	O94903	275 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	LDOC1	O95751	146 aa	Predicted RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	TMEM253	P0C7T8	217 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	DGKA	P23743	735 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	ACP1	P24666	158 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	MAP4	P27816	1152 aa	Known RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	IGFALS	P35858	605 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	CDH6	P55285	790 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	HNRNPK	P61978	463 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	YPEL5	P62699	121 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	BNIP3	Q12983	259 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	PDE1C	Q14123	709 aa	Predicted RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	FZD2	Q14332	565 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	KRT81	Q14533	505 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	ZNF235	Q14590	738 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	SMAD1	Q15797	465 aa	Known RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	BBS9	Q3SYG4	887 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	TMEM52B	Q4KMG9	183 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	HS1BP3	Q53T59	392 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	RALGPS1	Q5JS13	557 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	SARM1	Q6SZW1	724 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	ARHGAP36	Q6ZRI8	547 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	SRL	Q86TD4	932 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	CAMK1D	Q8IU85	385 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	LRRC49	Q8IUZ0	686 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	CNGA4	Q8IV77	575 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	BBS5	Q8N3I7	341 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	TAB3	Q8N5C8	712 aa	Predicted RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	EID2	Q8N6I1	236 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	OR4C6	Q8NH72	309 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	FBLIM1	Q8WUP2	373 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	TBATA	Q96M53	351 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	MGME1	Q9BQP7	344 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	WRAP53	Q9BUR4	548 aa	Known RBP	7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	PACSIN1	Q9BY11	444 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	PCDH12	Q9NPG4	1184 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	ETNK2	Q9NVF9	386 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	DNAJC28	Q9NX36	388 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	NLGN3	Q9NZ94	848 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	SIRPG	Q9P1W8	387 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	CTTNBP2NL	Q9P2B4	639 aa		7.72	□□□□□ -1.17
SNHG1-223	ENST00000545440	URB1	O60287	2271 aa	Known RBP	7.71	□□□□□ -1.17
SNHG1-223	ENST00000545440	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440		A0A1W2PQ67	120 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	NEMP2	A6NFY4	417 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	TRAFD1	O14545	582 aa	Predicted RBP	7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	MUSK	O15146	869 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	MFSD11	O43934	449 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	BUB1B	O60566	1050 aa	Predicted RBP	7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	MAFK	O60675	156 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	MTA2	O94776	668 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	PEX11B	O96011	259 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	CSF2	P04141	144 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	KRT7	P08729	469 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	ALPPL2	P10696	532 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	C6	P13671	934 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	CKMT2	P17540	419 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	CR2	P20023	1033 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	IL4R	P24394	825 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	HNF1B	P35680	557 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	ARSE	P51690	589 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	THOP1	P52888	689 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	POLR2L	P62875	67 aa	Known RBP	7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	BCL2L1	Q07817	233 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	SLC10A7	Q0GE19	358 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	GALNT2	Q10471	571 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	RALGDS	Q12967	914 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	DNAJC3	Q13217	504 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	DPYSL3	Q14195	570 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	PTK2B	Q14289	1009 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	PDK2	Q15119	407 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	IRF4	Q15306	451 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	CDCP2	Q5VXM1	449 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	NCBP2-AS2	Q69YL0	99 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	DHRS13	Q6UX07	377 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	MACC1	Q6ZN28	852 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	BEND4	Q6ZU67	534 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	TMPRSS12	Q86WS5	348 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	ZSWIM9	Q86XI8	627 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	TP53INP2	Q8IXH6	220 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	FAM20C	Q8IXL6	584 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	SLC25A45	Q8N413	288 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	ZNF548	Q8NEK5	533 aa	Predicted RBP	7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	NSMCE1	Q8WV22	266 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	FATE1	Q969F0	183 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	FAF2	Q96CS3	445 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	NUDCD1	Q96RS6	583 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	DUSP23	Q9BVJ7	150 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	ACSS3	Q9H6R3	686 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	USP29	Q9HBJ7	922 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	UCKL1	Q9NWZ5	548 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	DKK4	Q9UBT3	224 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	CSNK1G3	Q9Y6M4	447 aa		7.71	□□□□□ -1.18
SNHG1-223	ENST00000545440	FREM2	Q5SZK8	3169 aa		7.7	□□□□□ -1.18

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